Cucurbita moschata (crookneck pumpkin): 111444231
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Entry
111444231 CDS
T05248
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 5
KO
K05391
cyclic nucleotide gated channel, plant
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
111444231
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cmos04040
]
111444231
Ion channels [BR:
cmos04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
111444231
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
IQ
Motif
Other DBs
NCBI-GeneID:
111444231
NCBI-ProteinID:
XP_022938012
UniProt:
A0A6J1FCT8
LinkDB
All DBs
Position
Unknown
AA seq
736 aa
AA seq
DB search
MFDCGYKSQLMGGQREKFVRLDDLDSRLSSPSDSGMRRCGLNIDGFNRAVHGNDKPSGSF
KRGMRKGSEGLKSIGRSLKFGVSRAVFPEDLKESKKKIFDPQDKLLLFLNKLFVISCFLA
ISVDPLFFYVPVINQQSSCLGIDRKLAITVTTLRTVIDVFYLIHMALQFRTAYIAPSSRV
FGRGELVIDPAQIAKRYLRRYFIIDLVSVLPLPQIVVWRFLQRSKGSDVYVTKQALLFIV
FLQYIPRFLRALPLTSELKRTTGVFAETAWAGAAYYLLLYMLASHIVGALWYLLAVERND
TCWQKYCSAPCRKNFLYCGNQDMEGYSTWNQTGVDALMSRCKPADDNDSFDFGIFKQALS
SGIAASKNFVGKYCYCLWWGLQNLSTLGQGLQTSTYPAEVIFSIALAVLGLILFALLIGN
MQTYLQSLTIRLEEMRVKKRDSEQWMHHRLLPQELRERVRRYDQYKWLETRGVDEQSLVQ
TLPKDLRRDIKRHLCLALVRRVPLFESMDERLLDAICERLKPCLFTEYTYIVREGDPVDE
MLFIIRGRLESVTTDGGRSGFFNRTFLKEGDFCGEELLTWALDPKSGSNLPSSTRTVKAI
TEVEAFALVAEELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYSKRKTM
ELRQKEEVAAEESETSQTTTTTSGGGSYSIRATFLASKFAANALRGVQRYRNAKSAQELI
KLQKPPEPDFSADDAD
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgtttgattgtggttacaagtcacaactgatgggtggtcagcgcgaaaaattcgtgagg
ttggatgacttggactctagattgtcatcgccttctgatagtgggatgagaagatgtggt
ttgaatatagatggatttaaccgtgcagtccatggaaatgataagccatctggatccttt
aagagaggaatgagaaaagggtctgaaggacttaaatcaattggtcgatcactcaagttt
ggagtatctcgagctgtatttccggaggatcttaaagagtcaaagaagaaaatctttgat
cctcaagacaaattgctcttattcttgaataaactttttgtcatatcatgttttttagca
atatcggtggacccgctattcttttatgttcctgtcattaaccaacagtcgagctgtctt
ggcatcgatagaaagctggcaattacagtgacaacattgcgaacagttattgatgttttc
tatcttattcatatggctctccaattccggacagcttatattgctccatcatctcgggtg
ttcgggagaggtgaacttgtgattgatcctgcacaaatagctaaaagatacttgcggcgg
tatttcattattgatttggtgtctgtgctgccccttccacagattgtggtctggagattt
cttcagaggtccaaaggttcagatgtatatgtgacaaaacaggcccttcttttcattgta
ttccttcaatatatcccaagatttcttagagcgttaccattgacttcagaattgaaaagg
acaacaggcgtatttgcagaaacagcctgggcaggtgctgcatattatttgctattatat
atgcttgcaagtcatatagttggagcactgtggtacttattagctgtggaacgcaatgac
acatgttggcagaagtattgtagtgccccttgcaggaaaaatttcttatattgcggtaac
caagacatggagggctattcgacttggaaccagacaggtgtggatgccctaatgtcgaga
tgcaaacctgctgatgataatgattcgtttgattttggaatctttaaacaggctttgtcc
tctggcattgcggcatccaaaaattttgtcggcaaatattgttactgtctatggtggggc
ctacagaacttaagtacgcttgggcaggggcttcaaacaagcacgtacccggctgaagtg
atcttttctatagcattggctgtacttggtctcatcctctttgcacttcttattggcaac
atgcagacttatcttcaatctctaaccataaggcttgaggaaatgagggtgaaaaagcgt
gattcggagcaatggatgcatcatcgtttgctgccacaggaacttcgggagagagtcagg
cgatatgatcagtacaagtggttggagacccgtggagtcgacgaacagagtttggttcaa
actctccctaaggatcttaggagagatattaagcgacatctttgtctcgctttagtaaga
agggttcctctgtttgaaagcatggatgagaggctgcttgatgctatttgtgagcggcta
aaaccgtgtttgtttacagagtacacttacatagttcgtgagggtgatccagtcgatgag
atgcttttcattatacgtggtcggctcgagagtgtgactactgatggtgggcggagcgga
tttttcaatcgtacctttctgaaagaaggtgatttttgtggtgaagagcttttgacttgg
gctcttgacccgaaatctggttcgaatcttccatcttcgacaaggacggtaaaggctatt
acagaggttgaggctttcgccctcgtcgctgaagagttgaaattcgtggccagtcagttc
aggcgccttcacagtagacaggtgcaacatacgtttcgattctactcgcaacaatggagg
acatgggctgcttgcttcatccaagcggcatggcgccgatactccaagagaaagactatg
gaacttcgtcaaaaggaagaagttgcagcggaggaatccgagacatctcaaacgacgacc
accacaagcggaggaggctcttacagtattcgtgcaactttcctagcttctaaatttgct
gccaatgctctccgaggcgttcagcgatatcgcaacgcaaagagcgctcaggagttgata
aaattgcagaagcctcccgaaccagattttagcgcggatgatgccgattga
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