Cucurbita moschata (crookneck pumpkin): 111444350
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Entry
111444350 CDS
T05248
Name
(RefSeq) lysine--tRNA ligase, cytoplasmic-like isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
111444350
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cmos01007
]
111444350
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmos03016
]
111444350
Enzymes [BR:
cmos01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
111444350
Amino acid related enzymes [BR:
cmos01007
]
Aminoacyl-tRNA synthetase
Class II (A)
111444350
Transfer RNA biogenesis [BR:
cmos03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
111444350
Prokaryotic type
Other AARSs
111444350
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
111444350
NCBI-ProteinID:
XP_022938193
UniProt:
A0A6J1FI74
LinkDB
All DBs
Position
Unknown
AA seq
619 aa
AA seq
DB search
MAGSTEGLGSASATVDAVADSAPGSEETISKNARKKELKLKQKEEERRRKEELKEKAKQE
ASQSKKSVAVDDEEMDPTQYFENRLKYLASQKADGKNPYPHKFQVSMSLLEYIEKYGILN
NGDHLEEVSESLAGRIMSKRSSSSKLLFYDLHGSGAKIQVMTDARVSELDEAEFAMFHAS
VKRGDIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPKQKAASGSENANLKKNDAWAP
GCTRNPETYILKDQETRYRQRYLDLMLNLEVRQIFKTRAKVIQYVRKFLDDLDFLEVETP
MMNMIAGGAAARPFVTFHNDLNMKLFMRIAPELYLKQLVVGGLDRVYEIGKQFRNEGIDL
THNPEFTTCEFYMAFADYYDLMELTEKMLSGMVKELTGGYKVKYHSNGLDNESIEIDFTP
PFRRIDMIEELEKMANLNIPKNLASDEANKYLREACLKFEIKCPPPETTARLLDKLVGHF
LEETCVNPAFIINHPEIMSPLAKWHRARPSLTERFELFINKHEVCNAYTELNDPVVQRQR
FAEQLKDRQSGDDEAMALDETFCTSLDYGLPPTGGWGMGIDRLAMLLTDSQNIKEVLLFP
AMKPQDEPPAPKGGKWMVC
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggcgggttcgactgaagggttgggttctgcttctgcaactgtggatgcagtagccgat
tctgctccaggttctgaagaaactattagcaagaatgcacgcaagaaggaattaaagctg
aagcagaaggaagaggaaaggaggcgtaaggaggaactcaaggagaaagcaaaacaggaa
gcatcgcagagtaagaaatctgtagcagttgatgatgaagaaatggatcccacgcaatat
tttgaaaataggctgaaatatcttgcatctcagaaggcagatggtaaaaatccatatcct
cacaagtttcaggtttcgatgtctctcctcgagtatattgagaaatatggaattttaaac
aatggtgatcaccttgaggaagtctcggaatctcttgctgggaggataatgagcaaacga
tcctcctcctcgaagttgttattttatgatcttcatggttctggagctaaaatccaggtt
atgactgatgcacgtgtctcagagctcgatgaagctgaatttgcaatgtttcatgccagt
gtgaagcgtggggatattgttggtgtcactgggtttccaggaaaaacaaaaaggggagaa
ctcagtatttttccaaaatcattcattgtcctatctcactgtctgcatatgatgccaaag
cagaaggcggcttctggttctgagaatgcaaatttgaagaaaaatgacgcatgggcccca
ggttgtaccaggaatcctgaaacctatattttaaaggatcaggaaactcgttatcgtcaa
cgatatctggatttgatgttaaatttggaagtgaggcaaatattcaaaaccagagctaaa
gtaatccaatatgttaggaagtttcttgacgatcttgacttcttggaggttgagacacca
atgatgaacatgattgctggaggagcagctgcccgtccatttgtgaccttccacaatgat
ctcaacatgaaattgtttatgcgtattgcacctgaactttatcttaagcagttagttgtt
ggtggattggaccgtgtatatgagatagggaaacaatttagaaacgagggtatcgatttg
actcataatcctgagttcaccacctgcgagttctacatggcatttgcagactactatgat
ttgatggaactcactgagaaaatgctaagtggaatggtgaaggagcttacaggtggctat
aaagtaaaatatcattcaaatgggcttgacaatgaatcgattgagattgacttcactccc
cctttcaggaggattgacatgatagaggaattagaaaaaatggcaaatcttaatataccc
aagaacttggccagtgatgaagctaataaatatctaagagaggcatgcctgaagtttgaa
atcaaatgtcctccacctgaaacaactgctcgcttgctggataaacttgtgggacatttc
ctagaagaaacgtgcgtgaatcctgctttcatcatcaatcatcccgagattatgagtcct
ttggcaaagtggcatagagcaagacctagtctaactgaacgctttgaattgttcatcaac
aaacatgaagtatgtaatgcgtacactgaattgaatgatcctgttgtacaacgccagcgg
tttgctgaacaactcaaggatcgacagtcgggtgatgatgaagcaatggctttggatgaa
acattttgtacgtctcttgattatggattgcctcctactggtggctggggaatgggcatt
gaccggctagctatgttgttaacggattcgcagaacatcaaggaggttcttctcttccca
gccatgaagcctcaagatgaaccaccagctcccaaagggggaaaatggatggtttgctaa
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