Cucurbita moschata (crookneck pumpkin): 111444726
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Entry
111444726 CDS
T05248
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmos03009
]
111444726
Ribosome biogenesis [BR:
cmos03009
]
Eukaryotic type
90S particles
Other 90S particles
111444726
Pre-60S particles
Other pre-60S particles
111444726
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
111444726
NCBI-ProteinID:
XP_022938515
UniProt:
A0A6J1FK07
LinkDB
All DBs
Position
Unknown
AA seq
1147 aa
AA seq
DB search
MSEGTQHQQQDRDKDDAEVVSLSDASDICAQLMERYSKSSAPQHSHLLASAVAMRSILES
ESLPLTPAGYFAAAISAIDNASVSDTLDLTALSALLSFLAITLPLVPPTGISAPNASEAV
GVLVVLLGKKSLTVSTVRAAVKCLGILLGFCNLEDWGSVQLGFDTLLKFSVDRRPKVRRC
AQDSLITFLNSLKDSAIKKEASKLVFSFLESCMPSAIKLSTSSRIDGREVDNQSNDQHLD
VLHMLNVITLAIPLLSKKVRLKMLKKLIKLVKPRYSVVTGHSFKAIELILKSSKAGVFAS
EVESIIVSIGSYLSLGDANPLDTVLTAATLLKCAMDAGGSSIAIRNLPVVCGYMTGLLTS
DASKALHASGILKELIQDHVDQECLIGKDPCLEDCNLESIEVQAIKSTCGVFEDVLNSYD
EDLGKYITDVISDLFLKLGTTSFTYMKHILLKLADLINSAGNISHVDNLQNCVGSAVTAM
GPEKILTLIPISINAGDLTVQNMWLIPILQSHVTGASLGYYLEYIVPLAKSFQHESCKVK
KAATRKNLQTCAHKLWRLLPAFCRHPSDMHQSLGMLTELIITLLKEGSFMHEDIAVALQI
LVNNNTVAPNSNEASAYSKKTASKNRKALVSSSAKLLQPLAELFVGSVPTMRSHLKDTIG
CLASITDSRMTKNAFVSLLERFQFLNTKGEFEEPRANADELAQNAEGNSGTREIDCQRCV
MLELASAIIRGAEKDLVDLIYKFVKFAFQASYELGHVEAYQTLSRILEEHAWFASSRFSE
LVEMLIDLQSPADTSSQRSRFACFHILLVHSLKVNITSEEESNKAFLMLNEIIVALKSAE
EDNRKAAYDVLHCISSNLKDLSLTNSDVHKKFVAMILGYLSGASPHVKSGAISALSVLVY
EDADICLSIPDLVPSLLSLLQGKAIEVIKAVLGFVKVLVSSLQAKDLQSIVSDILLAALP
WSSVSRHHFRSKVTVILEILLRKCGYAAIEGVSPDKYKGFIKSLFEKRHNKTSSKDAEDA
NTDVADSPSNGVRDKQHDGLETAPKKNVAGQYRKRKWEKSSGFIGRKNDIVFTEDGDRSK
MIKRAAISSSKRSSTMDGFGDSRRADFSRHDAPRKAQQRGNKSGKKHQKERFGKPVKASK
FYHKSSR
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaggaactcaacaccagcaacaagaccgggacaaagacgatgctgaagttgta
tctctcagtgatgcttcagacatctgcgcccaactcatggagcgctattccaagtcctcc
gctccacagcacagccatctcctcgcttccgccgtcgccatgcgctccattctcgagtcc
gagtccctccccctcacccccgctggatactttgccgctgctatttccgccattgataat
gcttcggtttctgataccttggaccttactgccttatctgctttgttgtcctttttagcc
attacacttcccttggtgccgcctacgggaatttctgcgcctaatgcaagcgaagcggtg
ggtgtactggtggtactattgggaaagaagagcttgactgtgtccaccgtgagggctgca
gtgaagtgcttggggattttgttaggattttgtaacttggaggattggggctctgttcag
ttaggctttgatactttgctgaagttttcggttgaccggcgtcccaaggttcgacgttgt
gcccaagattcgcttattacgtttttgaattctttgaaggattctgctatcaagaaagag
gctagcaaattggttttttcttttctggaaagctgcatgccctcggcaattaaattaagc
accagcagccgtattgatgggcgtgaggtagataatcagtcaaacgatcaacatcttgat
gtccttcacatgctgaatgtgatcactctagctattccattactatctaaaaaagttcgt
ttgaaaatgcttaaaaaattaattaaacttgtaaagccacgttactcggtagttacaggg
cacagtttcaaagctatcgaacttattcttaaatcttcaaaagctggagttttcgcttcg
gaggttgaaagcattattgtttcaattggctcatacctttctttgggagatgcgaacccc
ttggacaccgtgcttactgctgccacgttgttgaaatgtgccatggatgcaggaggttct
agcatagcgatcagaaatcttcctgtagtttgtggttatatgacaggccttttgacttcc
gatgcaagtaaggctttacatgcttctggtatattgaaggagttaatacaggatcatgtg
gatcaagaatgcttgatcggtaaagatccttgtctagaagactgcaacctggagagcatt
gaagtacaagccataaaatcaacttgtggcgtttttgaggatgttctgaatagttatgat
gaagatcttgggaaatatattactgatgtcatatctgatctgtttctcaaactaggaaca
acttctttcacctatatgaagcatattttgctcaaacttgctgatttgataaatagtgca
gggaatatatctcatgttgataatcttcagaactgtgtaggatctgctgtaactgctatg
ggacctgagaagatacttactcttattcctatatccattaatgctggtgacttaaccgtg
cagaacatgtggttgataccaattctacaaagtcatgttactggagcatcacttgggtac
tatctggaatatattgtgccccttgcaaaatcatttcagcatgaaagttgtaaagttaag
aaggccgcgacaagaaaaaatctgcagacatgtgcccataaattatggagattactacct
gcattttgtcgccatcctagtgatatgcaccaaagtcttggaatgcttactgaacttatt
attacacttcttaaagaaggctcctttatgcatgaagatatagctgttgccttacagatc
cttgtgaataataacacagttgcaccaaattccaatgaagcatctgcttattcaaagaaa
acggcaagcaagaacaggaaggcgttggtatcatcttcagctaagttgcttcagcctcta
gctgagttatttgttggttctgtaccaacaatgcgctcacatttgaaggatacaattgga
tgcctggcttccatcacggactctaggatgaccaagaatgcttttgtgtcactgcttgag
aggtttcagtttctgaataccaagggtgagtttgaggagccaagagccaacgctgatgaa
ctagctcagaatgctgaaggaaattctgggacaagagagattgattgtcaaagatgtgta
atgttggagctagcttcagctatcattaggggagctgagaaggatttagttgatctaatc
tataaatttgttaagtttgcttttcaggcatcttatgagctgggccatgttgaagcgtat
caaactctgagcagaattctggaggaacatgcttggtttgcttcttctagattttctgag
ctggtagaaatgttaattgatctgcaatctcctgctgatacttcatctcaaagaagtcgg
tttgcttgttttcacattcttctggttcattcattaaaggttaacattacctcagaggag
gagagcaacaaggcttttcttatgctcaacgagatcatagttgcattaaaaagtgcagag
gaagacaacaggaaagcagcttatgatgtacttcattgtatcagttccaacctaaaagat
ttgtcacttacgaattctgatgtacataaaaagtttgtggccatgatattaggctatctg
tctggtgcatctcctcatgtaaagagtggagcgatctctgcactctcagtgctggtctat
gaagacgcagatatatgtctttcaatccctgatcttgtgccctccctcttatctttgcta
caaggaaaggctatagaagttataaaggcagtgctagggtttgtgaaagttctggtttct
tccttgcaagctaaagatcttcagagcatcgtttctgatattcttttagcagcgctacct
tggtcatctgtctcaaggcatcattttcgatcaaaggtcacagtaattctggagattctc
ttacggaaatgtggttatgctgcaattgagggtgttagtccggacaaatacaagggtttc
atcaagtctcttttcgagaaacgccataataagaccagttccaaggatgctgaagatgct
aatacagatgttgcagattcaccttctaatggggtaagagataagcaacatgacgggctg
gagactgcgcccaagaaaaatgtagctggtcaatacaggaaaaggaagtgggaaaaatct
tctggtttcatcgggagaaaaaatgatattgtattcactgaagatggtgatagatctaag
atgataaaaagagctgcaatctccagtagtaagaggagttcgactatggatggtttcgga
gacagtcgtagagcagatttttcgaggcatgatgctcctagaaaagctcaacagagagga
aacaaatctggaaagaagcatcagaaagaaagatttggtaagcctgttaaagcttcaaaa
ttttatcacaagagttctagatga
DBGET
integrated database retrieval system