Cucurbita moschata (crookneck pumpkin): 111444867
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Entry
111444867 CDS
T05248
Name
(RefSeq) RNA polymerase II transcription factor B subunit 4
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03022
Basal transcription factors
cmos03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111444867
09124 Replication and repair
03420 Nucleotide excision repair
111444867
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmos03021
]
111444867
03400 DNA repair and recombination proteins [BR:
cmos03400
]
111444867
Transcription machinery [BR:
cmos03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
111444867
DNA repair and recombination proteins [BR:
cmos03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
111444867
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
111444867
NCBI-ProteinID:
XP_022938728
UniProt:
A0A6J1FJQ6
LinkDB
All DBs
Position
Unknown
AA seq
297 aa
AA seq
DB search
MASAPSKLYADDVSLLVVLLDTNPFFWSTYSLPFSKFLSHVLAFLNSILVLNQLNEVVVI
GTGYASCKYLYNSSSYSNRSLEDGRMPALCTRLLNNLEEFMIGDEQSIEEDPRGGTMSSL
LSGSLSMALCYIQKVFRSGSLHPHPRILCLQGSPDGPEQYVAIMNSIFSAQRSMVPIDSC
YIGSHNSAFLQQASYITGGVYLKPQQMDGLFQYLSTVFATDLHSRTFLQLPKSVGVDFRA
SCFCHKKTIDMGFVCSVCLSIFCKHHKKCSTCGSVFGETPVAVDSVVSKLKRKTPET
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgctccttcgaagctctatgcagatgatgttagcctgttagtggttttactg
gatacaaatccatttttctggagcacatattctctcccattctccaagtttctctctcat
gtacttgcttttctgaactccattttagttctgaatcaacttaatgaggttgtggtcatt
ggtaccggatatgcttcatgcaagtatctatacaactcgtcttcttactcaaatcgtagc
cttgaagatggtagaatgcctgcactttgcactcgtttattgaataatttggaggaattc
atgattggggatgagcagtcaatcgaggaagatcccagaggagggaccatgtcttcactt
ctttctggatcgctctccatggctttgtgttatatacagaaagttttccgatctggatct
ctccatccccatcctcggatcctttgcttgcagggatccccagatggacctgaacaatat
gttgcaatcatgaattccatcttttctgctcagcgttcaatggttcctatagattcatgt
tacattggttcgcacaattctgcatttcttcagcaggcttcttacataactggtggcgtt
tatctgaagcctcagcaaatggatgggctgtttcagtatctctctacagtgtttgcgact
gatttgcattcccggaccttcttacagcttccgaagtctgttggtgtcgattttcgtgca
tcgtgtttctgccacaaaaaaacaattgatatgggctttgtctgttctgtttgtttatct
atattctgcaagcatcacaagaaatgttctacctgtgggtcagtttttggtgagacccca
gtagctgtcgattcagtagtgtcgaaactgaagagaaaaactccagaaacatga
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