Cucurbita moschata (crookneck pumpkin): 111444923
Help
Entry
111444923 CDS
T05248
Name
(RefSeq) pre-mRNA splicing factor SR-like 1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111444923
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmos03041
]
111444923
Spliceosome [BR:
cmos03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
111444923
Complex C
U4/U6.U5 tri-SnRNP related factors
111444923
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
111444923
NCBI-ProteinID:
XP_022938827
UniProt:
A0A6J1FF63
LinkDB
All DBs
Position
Unknown
AA seq
461 aa
AA seq
DB search
MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWVEPYVK
DEEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVANLEKLKLPSKHSG
VTGETHRLGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPTSAIDRDNNDD
LRRSPSSRRSQSREHPDTRERSRDRDYDRERSRDRDYDRERSRDREYDRDRDRDRGRDRD
REQEHDRDREKYRDRERDRERDREREKARDRERDRERSYDYDRRTHYTDRDGRRDFERSS
RDGGTRHYRRSRSRSRSRSRSRSLQTGVNAHGHHEREPSPARGRTSEKTSIISSNLAKLK
DMYGDVSEQKGGGGGGDSSKERINRRDSSGEEVIRLGGSWR
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggagataaagacttgcgggaagccaattgattctttgctggagaaggttctatgtatg
aatattttgtcttctgattactttaaggagctttatcgtttgaagacataccatgaagtg
gttgatgaaatttataaccaagttgatcatgtggagccatggatgactgggaactgccgt
ggtccttcaacggcattctgcctcctgtacaagtttttcaccatgaaacttactgtgaag
caaatgcatgggctgctaaagcacgaggattccccttacatcagagcgattggatttctg
tacttgagatacgttgcagatccaaagactctctggaattgggttgaaccgtatgttaaa
gatgaagaggaattttcaccaggatcccatggacgaatgactacaatgggtgtttatgtg
cgtgatttgctccttggacagtactacttcgatactcttttccctcgtattccagttcct
gtcttgcgacaagttgtagctaatctcgaaaagttgaagcttccaagcaaacattcaggc
gtgacaggggaaacccatcgattggggtctgaagacactgcacggcgaccaccttctgta
aaagcttcactttcagtctcctttggacaacgagccccacatcgtgcctcaactagggac
tcatctccagttcgtcgtacgctaccaacatcagctatcgacagagataacaacgatgat
ctacgaagatctccaagcagtcgccgtagccaaagtcgtgaacatccagatactagggag
aggagcagggatagagattatgacagggagagaagcagggatagagattatgacagggaa
aggagcagggacagagaatatgacagggacagggacagggacaggggaagggatagagac
cgagagcaagaacatgatcgggacagagaaaagtatagagatcgggagagggaccgagaa
agagatagagaaagagagaaagccagggatagggagcgagacagagaacgaagttatgat
tatgatcgaaggactcattacactgatagagatggtagaagggacttcgaaagaagtagc
cgtgatggtggtacaaggcattaccgaaggagtcgtagccgaagtagaagcaggagcaga
agtcgaagtctacaaacaggagtgaatgcccatggccatcacgaacgagagccaagtcct
gcaaggggcagaacctcagagaagacgtcgatcatatcgagcaatctggcaaaactaaaa
gatatgtatggtgatgtgagcgagcagaaaggaggaggaggaggaggggattcaagcaaa
gaaagaattaacagaagggatagtagcggtgaagaggtgatcagattgggtggttcctgg
agatag
DBGET
integrated database retrieval system
