Cucurbita moschata (crookneck pumpkin): 111445201
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Entry
111445201 CDS
T05248
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 2-like
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmos04121
]
111445201
Enzymes [BR:
cmos01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111445201
Ubiquitin system [BR:
cmos04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111445201
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
zf-rbx1
zf-ANAPC11
MFS_2
AF_0924
Prok-RING_4
zf-RING_4
DUF3487
Motif
Other DBs
NCBI-GeneID:
111445201
NCBI-ProteinID:
XP_022939223
UniProt:
A0A6J1FL26
LinkDB
All DBs
Position
Unknown
AA seq
449 aa
AA seq
DB search
MALSAMNPGLALLFSLLLVGSCGCAANVVLIGTNVTLSFDSVEANFAPAIGSPGEPGVLY
LAKPLDACSTLESNTALPVNSSSPFVLIIRGGCSFEDKVRRAQMAGFKAAIIYDNEDGGG
LIAMAGSSAGIRIHAVFVTKSSGETLKKYAGLANVEIWIVPSFENSAWSIMAISFISLLA
MSAVLATCFFVRRHRIRRGRPRSSHAQEFRGMSRRVVKAMPSLIFTTALEDNCTSVTCAI
CLEDYTAGEKLRILPCRHKFHALCVDSWLTAWRTFCPVCKRDARTSTGDPPPSESTPLLS
SAPSSVASSSILSSVRSSLPPSSAIQISPSSRSPSVSRNHSLSSTPYLQQSLRSSYHQAS
SLSISRSSVELRNASSQRSYASHLVSPYSSCYPSMSPLHSRYMIPLIPSPSNASPSIIGS
SSHQHNPLHCSGSAASFSPFASAQSLPEC
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggctttaagtgctatgaatccaggtctcgcgttgttgttttcacttcttctggttggt
tcttgcggctgcgcagctaatgtggtattgattgggaccaacgtcactctttcattcgat
tccgttgaagctaatttcgctcctgcaataggcagcccaggggaacccggtgtactgtat
ctggctaaacctcttgatgcatgctcgacattggaaagtaatactgcgctgcctgtaaac
tctagttcaccatttgtgcttataattagaggaggatgtagcttcgaggataaagtgagg
agagcccaaatggctggatttaaagctgcaatcatttatgataatgaagatggtggtggc
ctgattgcgatggcagggagctcagctggtattagaatacatgctgtatttgttactaaa
tcatccggtgaaacattgaagaagtatgcaggcttggctaatgttgagatatggatagtt
ccaagctttgaaaactctgcatggtccattatggctatctcctttatttctcttcttgca
atgtctgcagtgcttgctacttgtttcttcgttcgtagacatagaataagacgaggacgt
cctcgatcttctcatgctcaagagtttcgaggcatgagcagacgtgtagtaaaagcaatg
ccaagtctgatatttacaactgctttagaggataattgtacatcagtcacatgtgccata
tgccttgaggactatactgctggtgagaagctgagaattctaccatgtcgtcacaaattt
catgctctctgtgtggactcatggcttactgcttggagaaccttctgtccagtctgcaag
cgagatgctagaacgagcactggtgatccaccaccttcagaatccacaccattgctttca
agcgctcccagctctgttgcttcatcctcgatattatcttctgtgagatcatcattacca
ccaagctctgccattcaaatatccccatcatctagatcgccatcagtatctcggaaccac
tctctctcaagcaccccataccttcagcagtctctgagatcctcctaccaccaagcttca
tccttgagcataagtagaagttcagttgaactcagaaatgcatcttcccaacgatcttat
gcttctcatttggtttctccgtattcctcatgttacccatccatgtcacctttacattca
agatacatgattccgctcattccaagtccaagcaatgcctcacccagcatcattggttct
tccagtcatcaacacaatcccttgcattgcagcgggtcagctgcaagcttttctccgttt
gcttcggctcagtctctccctgaatgctga
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