Cucurbita moschata (crookneck pumpkin): 111445300
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Entry
111445300 CDS
T05248
Name
(RefSeq) DNA mismatch repair protein MLH3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
111445300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmos03400
]
111445300
DNA repair and recombination proteins [BR:
cmos03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
111445300
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
MutL_C
HATPase_c
DUF1409
Motif
Other DBs
NCBI-GeneID:
111445300
NCBI-ProteinID:
XP_022939754
UniProt:
A0A6J1FI48
LinkDB
All DBs
Position
Unknown
AA seq
1247 aa
AA seq
DB search
MGIIKPLPKSVRSSVRAGVILYDATKVVEELVYNSLDAGASKISIFIGIGTSYVKVVDNG
SGITRDGLALLGERYATSKFHDLIDMDTKGKTFGFRGEALASISDVSLLEIITKACGRAN
GYRKVIKGCKCLYLGIDDDMEDIGTTVIVRDLFYNQPVRRKHMQFSPKKVLQAVKKCVVR
IALVHSKVSFKIVDIESESILLYPNPSPSPLSLLRSGFGSEVSRSLHELKIGDGDLKLSG
YICSPFDTFTIKAVQYVYINRRFICKGQIHKLLNQLASRFVSLSPQTDQACHSRKRSRFQ
ANPAYILNLDCPGSFYDLTFESSKTFVQFKDWTSILTFIEETIQQFWKEKYSSGKSLVHT
TSIVGGDQLWKDEDNMISTNSDFREDVILFPPESIRSVKKSRMRSPQASLIDLFSPSAML
TKDDDILSNSLHEKACENSHTSSSELNDVHRQARMQFGNQAADHFSGLWSTPLAKCSTTA
VQKGDRHPWVPDNIFVSEDSFLDRRLASPKRCDDIVEDNIFSSDLKGQSSKVYIDMINGS
AESTPSSYFHEFSYDDNIFTGNKPSLRGCTSGSSFQLESTSILGDKLYIQNDVIKRIQKQ
GIPDDEVDVLKLDGYIQGSDFYAGDSLHAEFTEENIYSCHLDKHVQKFFSSYQTRNSPDV
HVTPNPRLASEWDVDCFSVRDGVERNWRSRDRTPFRDLVDGEDKGCGFDSDIMLRSSKKN
YIPSCIDSELIIDDVLDTREDLSTSLEKSNNFDHSSPVSPNMHSCQKYLFNWRLPGKDWE
KAYGSSELKFGHQAFKQKYVSVERPRRCKSAPPSYKRKTSFYCLYRRKEEKHNAAGFYGL
DQRKTDKFNATNFYCMDQGKEEKLRASAFLDSPPHLELAELRDSKHFSSTNNLYIKPSPL
DDLSMGTRTDMTKTPAITGNNKEKQEGKISKQFQSDVKVTASALELCSKETRESDLWIKW
KNCCPTTRNDGPRAFEDEVSILDISSGFLSLARNSLVPKSIDKNFLEDAKVLLQLDKKFI
PVVSGGILAVIDQHAADERIRLEDLRQKLLSGEAKTIAYLEDEHELVLPEIGYQLLYNYS
DQVKEWGWICNIHAQDSKSFQRNLNILYKQETVITLMAVPCILGVNLSDADLLEFLDQLA
DTDGSSTMPPSVLRVLNSKACRGAIMFGDSLLPSECSLIVDELKQTSLCFQCAHGRPTTV
PLVNLEALHKQIREMEILDKNGSNGTWHGLRRHELSIERMLQHIGSA
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atggggattatcaagcccttgccaaagtctgttcgtagttctgtgcgtgctggcgttata
ctctatgatgccacgaaggttgtggaagagcttgtttataatagcttggatgctggtgcg
tcaaagatttcaattttcattggcattggaacatcctatgtcaaagtagtggacaatgga
tctggtattactagggatgggttagccttgctaggagaaagatatgcaacttcgaaattc
catgatctcatagacatggataccaaaggcaaaacatttggctttcgaggagaggcattg
gcttccatttcagatgtatcgttgttggagatcataaccaaagcatgtgggagggcaaat
ggatatcgtaaagtcataaagggttgcaagtgcttgtatcttggaattgatgatgatatg
gaagatattggtactacagttattgttcgagatctattttacaaccaaccagttcgaagg
aagcatatgcaattcagccccaagaaggtcttgcaagcagtcaagaaatgtgtagtccgt
attgcccttgtgcattctaaagtttccttcaaaattgtagatattgaaagtgagagcatc
cttctttacccgaatccctctccttctcctttatcacttttgagaagtggctttggcagc
gaggtttccaggtctctccatgaattaaaaatcggtgatggggacttaaagctttctggt
tatatatgcagtccgtttgatacgtttactatcaaggctgttcaatatgtctatattaac
agacgattcatttgcaagggccaaattcataaattacttaatcaactggccagtagattt
gtaagcctgagtccgcagactgaccaagcctgtcacagcaggaagagaagcaggtttcaa
gcaaatcctgcttatattttaaatttagattgccctggatctttctatgacctaacattt
gaatcatccaagacctttgttcagtttaaggactggacttcaatacttaccttcattgaa
gagaccattcaacaattttggaaagaaaaatatagtagtggaaaatctttggtccataca
acctccatagttggaggagatcagctgtggaaggatgaagataacatgatatcaacaaat
tcagattttcgtgaggatgttatacttttccctccagagagtattcgatctgtgaagaag
agcagaatgcgaagccctcaggcctcccttattgatttgttttctccgtcagcaatgctt
acaaaagatgatgacatcttgtccaatagtttgcatgaaaaggcatgtgagaattcacac
acaagttcaagtgaattgaatgacgttcaccgacaagctaggatgcaatttggtaaccaa
gctgccgatcatttctcaggattatggagtactcccttggcaaaatgctcaactacagct
gtccaaaaaggtgacaggcatccatgggtacctgataacatttttgtatctgaagactcc
tttctggatagaaggctggcttctcccaagaggtgtgatgacattgttgaggacaatatc
ttcagttcagacttgaaaggtcaatcttctaaagtgtatatcgatatgatcaatgggtct
gccgaaagtacaccatcttcttactttcatgaatttagttatgatgacaatatcttcacg
ggtaacaaaccctcccttcggggatgcacctcaggaagcagttttcaacttgagagtact
tccattcttggtgacaaactgtacattcaaaatgatgtcatcaaaagaatccaaaagcag
ggaatccctgatgatgaagttgatgttctaaagcttgacggttacatccagggttctgat
ttttatgctggagactcattgcatgctgagtttactgaagaaaatatatactcatgtcat
ttggacaagcacgtgcagaagtttttctcaagttatcagactagaaattccccagatgtt
cacgtgaccccaaatcccagattagcctcagaatgggatgttgattgcttcagtgttagg
gatggggttgaaaggaactggagatctagagacaggactcccttcagggatttggtggat
ggtgaggataagggctgcggatttgattctgatatcatgttgagaagttccaaaaagaat
tacataccaagctgtatagatagtgaactgataattgatgatgtccttgatacaagagaa
gaccttagtacttcccttgaaaaatctaataattttgatcattcttctcctgtgagtcct
aatatgcactcctgtcagaagtatcttttcaattggagattacctggaaaagattgggaa
aaggcttatggaagctcagagcttaagtttggacatcaagcttttaaacagaagtacgtt
tctgttgaaaggcctagaagatgcaaatcagctccaccttcttacaaaagaaaaactagt
ttctattgcctgtaccgaagaaaggaagaaaagcataatgccgccggtttctatggcctt
gaccaaagaaaaactgataagtttaatgccacaaatttctattgcatggaccaagggaaa
gaagaaaagcttagggcatcggccttccttgacagcccacctcatttagaactagctgag
ctgagagattccaaacatttctctagtactaataatctttatattaagccaagtcctctt
gatgacttatcgatgggaactagaacagatatgacaaagacgcctgctattacgggaaat
aataaagagaaacaagaaggaaaaatttccaagcagttccaatccgatgttaaagttact
gcatctgctttagaattatgctcaaaggaaactcgagagtcagatttatggatcaaatgg
aaaaattgctgtccgactacaagaaatgatgggccacgtgcttttgaagatgaagttagt
atacttgatatctcttcaggattcctatctcttgccagaaattccttagttcccaaatcc
atcgataagaatttccttgaagatgccaaagttcttctacagcttgataagaaattcatt
ccagttgtttctggtggaatactggctgttattgatcagcatgctgcagatgaaagaatc
cgacttgaagatcttcgtcaaaagttgttgtctggtgaagcaaagacaatagcctatctg
gaggatgaacatgaactggtgctgcctgaaattgggtaccagttgttgtacaactatagt
gatcaggttaaagagtggggttggatctgtaatattcatgctcaagattcgaaatccttc
caaaggaatttgaatatcctatacaagcaggaaacggtcatcacgctaatggcagtacct
tgcatactaggagttaatttatctgatgcagatctgctggagtttcttgatcagcttgct
gatacagatggctcatcaacaatgccgccatctgtgcttcgagttcttaattcaaaggcc
tgcagaggtgcaattatgtttggagactctttgttaccttcagagtgttcccttattgtt
gatgaactgaagcagacttctctgtgtttccaatgcgcccatggacgaccaactacagta
cctctcgtgaacttggaggcattgcacaagcagataagggagatggaaatattagataaa
aatggttcgaatggaacgtggcatgggctgcgacgacatgagctgagcattgaacggatg
ttgcagcacataggttcggcctaa
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