Cucurbita moschata (crookneck pumpkin): 111445374
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Entry
111445374 CDS
T05248
Name
(RefSeq) protein RNA-directed DNA methylation 3-like
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW1_SPT5
KOW4_SPT5
Spt5-NGN
KOW
KOW5_SPT5
KOWx_SPT5
KOW2_Spt5
Motif
Other DBs
NCBI-GeneID:
111445374
NCBI-ProteinID:
XP_022939482
UniProt:
A0A6J1FGX3
LinkDB
All DBs
Position
Unknown
AA seq
1743 aa
AA seq
DB search
MASKGKGIAKDASPGKRKLRDDNNSSAARKRRDRSVLQFFEDVTPDFGGESDDSDFFDGF
MEEDFETIPAFKNDDAKAQNIPFFPKEEEMNEEEFDRMMEEHYNQGPGYGAFAEENYENK
NSTGRNPPLQSARDTISLWKVKCMVGRERQSVFCLMQKFVDLNSFGTKLQIKAAFCVEHV
KGFIYIEAPRQYDLIEACKGISGIYSTRVASVPENDISQLLTVRSRVSEVAVGTMARVKN
GKYKGDLAQIVAVNNARKRATVKLVPRIDLQAMAEKFGGGSAAKKTSNPAPRLINSSELD
EFRPLMQFRRDRETGKLFEFLDGMMLKDGYLYKKISLDSLNCWGVMPSEDELLKFKPPES
NESHDLEWLSQLYGEKKKKKIIRTEKGGGKGEGSSGSCSTSSFGDHDLICFGRKDFGMIL
GMEKDDSYKILKDSPNGSVVVNVQRKELKGGSLDAKFTAADHNGKMISVSDNVKVLEGSL
KDKQGIVKHVYRHTVFVYDENEMENDGYFCCKSNKCEKIKISYDAPSGKEDDKGFSGFED
FSSSPKSPLSPKKPWAEKETGREYNRDDRGDGMFSIGQTLRIRVGPLKGYLCRVIAVRKR
DVTVKLDSQQKVLTVRSDFLSEVQRKSSAVSLSEDPLKPFDILGNEGSSQDWMGGTGSSA
GGDGWNSTGPSSEGNPWPSFPESSTLNGPGSSSTNPIGSESFDAKKDEDSPWVSKSTPDA
STSWGAAKSSVDTANNGQASGWGKSDSWGKTIAKTCSDGNASGAWGKTAVPSGDSAGLTE
HTWDKWDKGKQVSSDNQTGNWGDGTSGKNEHSAWSRDKDAESGGWKKTQSANFDDDKTPA
ESAGDCTNPEAENKVNPSGWNEGTSMKGSQTSNWGNQDETGGWGKPKNVGNGGSSAWNKS
TSGDGAVENDSWNKPKLCSHDENIGKKGWGQSNEASDNGNKWQSSRSDGGTKWGTNESEH
EGGKDKSDSSSLTTPRGDQSVGGWDKQRSSNDTKASEENSPWNKKSVESGKDGELKNQGS
GWNVGKTSGGDSASGWGQASKEAGSSDLAGNWGSNWKKNSDVGNEDSSLAKKSNWSSGSG
NSNWGEKSNWNSGNEYNANHSTGGAEAQTDVSNDTSGYGSWREENSDRGGYRGRGGFRGR
GERGRFGGRGRSDRGGFGRGGFGGRGRGRWNSEGGSNGGDNKGWSSGGGGDNRGWSSGGG
GGDDNKGWSSGGGGEDNKGWSSGGAGGGDNKGWSSGGGGDNKGWSSGGGGDNKGWSSGGG
DNKGWSGGGGGGSSDWERSGSDRGGFGGRGRGRWSSGSGSNDGDREKFGSDRGGFRGRGR
GRWNQEGGSHDGDNGGWRGGRGGYGGRGRGRWNQEGDSNDGDNGGGGGGWSSGGGGGSWG
KSGSDRGGGFGGRGSGKWNQEGGSNNNGRWSSGGGAGSWNQGGDEKNQPQSWKPSNDGGD
KFGGQQGSGWKEPTSGNEPNNWKSSGSSGADHNSGWNKSTTGKEIEESDSQKNSWSQATK
VDDAHGGGGWQKPASGWNGGTENQTVKNDVNASAKDGGWGKPASGWNEGSGNQGNNNWKF
SETSGEGQSSTWNKEANVGAQEGGEEGGSEKPTSSWNAEQPQGGGGGGSEKPTSSWNTEK
PQGGGGGGGWEKPTSSWNTEQPQGGGGLEKPPSSWNTEKPQGGGGGSEKPMSSWNTEQPQ
GGGGGSEKPMSSWNTEQPQGGGGGWEKPTSSSNTEQPQGGGGGGAWSKSSSAEDGKSSSG
WGR
NT seq
5232 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaagggcaaggggatcgccaaagatgcctctcccggtaaacggaagcttcgc
gatgataataattcctccgcagcccgcaagaggagggaccggagcgttctccagttcttt
gaggatgtcactcctgatttcggtggcgaaagcgatgacagtgatttttttgatggtttc
atggaggaagattttgagacaataccggcttttaagaatgatgatgcaaaagctcaaaat
attccattcttcccaaaagaagaagaaatgaatgaagaagaatttgatagaatgatggag
gaacactacaatcaaggtcctggatacggtgcatttgcagaagaaaattatgagaacaaa
aattcaactggaagaaaccctcccctgcaatctgccagggatactatctctctgtggaag
gttaaatgcatggttgggcgtgagcggcaatcagttttttgtcttatgcagaaatttgtt
gatttgaactcatttggtaccaagctacagataaaagctgcattttgtgtggagcatgta
aaaggttttatttacattgaagctcctaggcagtatgatttgattgaggcatgtaaaggc
ataagtggaatatattctacccgtgtagcttctgttccagaaaacgacatctctcagtta
cttactgttcgaagtagagtcagtgaagttgctgtgggtaccatggctcgtgtaaaaaat
ggaaaatacaagggagaccttgctcagattgttgcggtcaacaatgcacgcaagagagcg
acagtgaaactggttccaaggattgatctccaagcaatggctgaaaaatttggtggagga
tcagctgctaagaaaacttccaatcccgcaccacgattgatcaactctagcgaacttgac
gaatttcgaccacttatgcaatttaggcgtgaccgtgaaactggaaagctttttgagttt
cttgatgggatgatgctcaaggatggatatctatataaaaaaatttctttagattcatta
aactgctggggggtgatgccatctgaagatgagctcttaaagttcaagcctcctgagagc
aatgaatctcatgatctggagtggctttctcaactttatggtgaaaagaagaaaaagaag
attattaggactgaaaaagggggtggaaaaggagagggctcatcggggtcttgttccacg
agcagctttggagatcatgatcttatctgttttggccggaaagatttcgggatgatatta
ggaatggaaaaagatgatagctacaagattttgaaggacagccctaatggatctgttgtg
gtgaatgtgcaacggaaagagttaaaaggtgggtctttggatgccaaatttactgctgcc
gatcacaatggaaagatgatctctgtttcagacaatgtcaaagttttggaaggatcattg
aaggataagcaagggattgttaagcatgtataccgacacacagtatttgtatatgatgag
aatgagatggaaaacgatggttatttctgctgcaaatctaacaagtgtgagaaaatcaag
atttcttatgatgcacctagtggaaaggaggatgacaagggtttctctggttttgaggat
ttctcctcttctcccaagtcacctctatcacctaaaaagccatgggcagagaaggaaact
ggtcgtgagtacaaccgtgatgacagaggagatggaatgttctccattggtcagaccttg
agaatacgtgttggtcctttaaagggatacctgtgccgtgttatagctgtacgcaaaaga
gatgttacagtgaagcttgattctcaacaaaaggttcttacagtcagatcagattttctt
tcagaggtacagagaaagagctctgcagtgtctcttagtgaggatcccctaaaaccattc
gatattctgggaaatgaaggcagctcccaagattggatgggcggtacagggtcatctgca
ggtggtgatggctggaattctaccgggccttcgtcagaaggaaatccttggcccagtttc
cctgagtccagtaccttgaatggtccagggtccagttccacgaatcctattggttctgaa
agttttgatgctaaaaaagacgaagattctccttgggtgagcaagtcgactccagatgca
agcacttcctggggtgctgcaaaatcaagtgttgatactgccaacaatggtcaagcatct
ggatggggaaagagcgattcgtggggcaaaactattgccaaaacttgttctgatggcaat
gcctctggtgcctggggcaaaactgctgtacctagtggagattctgcaggccttactgaa
catacttgggacaagtgggacaaaggaaagcaggtatcttctgataatcagacaggaaac
tggggtgatggaacatctggaaagaacgaacacagtgcatggagcagagataaagatgca
gaatctggggggtggaaaaagactcaaagtgctaattttgatgatgataagactccagcg
gaatccgcaggtgactgtaccaatcctgaagcagaaaataaggtgaatccaagtggctgg
aatgaaggcacttcaatgaagggaagtcaaacatcaaactggggtaaccaggatgagaca
ggtggttggggtaaaccgaagaacgtgggtaatggtggcagttcagcttggaataaatct
acttctggtgatggagctgtagaaaacgacagttggaataaaccaaaactttgtagtcat
gatgaaaatattgggaaaaaaggatggggacagagtaatgaagccagtgataatggtaac
aaatggcagagttcaaggtctgatggtggaacaaaatggggcactaatgaatcagaacat
gagggtgggaaagataaatctgattcctcaagtttgacaactcccagaggagatcaatcg
gtgggaggttgggataagcagcgcagttcaaatgatacgaaagcctctgaggaaaattct
ccttggaataagaaatctgttgaaagtggtaaagatggcgagctcaagaatcaaggcagt
ggttggaatgttggaaaaacttccggtggagattctgcatctgggtggggtcaggccagc
aaggaagctggttcaagtgacctagcgggtaactggggttcaaactggaaaaagaattct
gatgttgggaatgaggattctagtttggccaagaaaagcaactggagttctggaagtggc
aattctaactggggcgagaaaagtaactggaactccggaaatgaatataatgctaatcat
tccaccggtggtgctgaagctcaaactgacgtttcaaatgatacctcaggttatggaagt
tggagggaagaaaatagtgatagaggaggatatagaggtagaggtggtttcagaggaagg
ggtgaaaggggccggtttggtggtagaggcagatctgatagaggtggttttggcagagga
ggatttggaggcagaggccgtgggagatggaatagtgaaggtggttcaaatggtggtgac
aataaagggtggagtagtggtggtggtggtgacaatagagggtggagcagtggtggtggt
ggtggtgatgacaataaagggtggagtagtggtggcggtggcgaagacaataaagggtgg
agtagtggtggtgctggcggcggtgacaataaagggtggagtagtggtggtggaggtgac
aataaaggatggagtagtggtggtggtggtgacaataaaggatggagcagtggtggtggt
gacaataaaggttggagcggtggtggtggtggtgggagcagtgactgggagagatctgga
tcagatcgaggtggatttggtggcagaggtcgtggaagatggagcagtggaagtggttca
aacgacggtgacagggagaaatttggatcagaccgaggtggatttagaggcagaggccgt
ggaagatggaaccaagaaggtggctcacatgatggtgacaatggagggtggaggggcggt
agaggtggatatggaggtagaggccgtggaagatggaatcaagaaggtgattcaaatgat
ggtgacaatggaggaggaggaggaggttggagtagcggtggtggtggtggtagctggggg
aagtccggatcagacagaggaggggggtttggaggtagaggctctggcaaatggaaccaa
gaaggtggttcaaataataatggaaggtggagcagtggcggtggtgcagggtcttggaac
caaggaggtgatgaaaagaaccagccgcagagctggaagccgagcaatgatggtggcgac
aaatttggtggtcagcagggatcaggttggaaggaaccaacaagtgggaatgagccaaat
aattggaaatcgtctggttcttccggtgcggatcataattctgggtggaacaaatcaacg
acaggcaaggagattgaagagagtgatagtcagaagaacagctggagccaagcaacaaag
gtggatgatgctcatggcggcggaggctggcagaagccagcatctggttggaatggagga
actgagaatcaaacagtaaagaatgatgtgaatgcaagtgctaaagatggaggttggggg
aagcctgcttctggttggaatgagggaagtggaaatcagggcaacaataattggaaattt
tcagagacttctggtgagggtcaaagttccacctggaacaaagaagccaatgtaggtgcc
caagaaggaggagaagaagggggttcggagaagccgacgtccagttggaatgccgagcag
cctcaaggaggaggaggagggggttcagagaagcctacgtccagttggaataccgagaag
cctcaaggaggaggaggaggagggggttgggagaagcctacgtcgagttggaataccgag
cagcctcaaggaggagggggtttggagaagcctccatccagttggaataccgagaagcct
caaggaggaggagggggttcggagaagccaatgtcgagttggaatactgagcagcctcaa
ggaggaggagggggttcggagaagccaatgtcgagttggaatactgagcagcctcaagga
ggaggaggaggttgggagaagcctacgtccagctcgaataccgagcagcctcaaggagga
ggaggaggaggagcttggagtaaatccagttctgccgaggacgggaagtcgtcatccggt
tggggtcgctga
DBGET
integrated database retrieval system