Cucurbita moschata (crookneck pumpkin): 111445522
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Entry
111445522 CDS
T05248
Name
(RefSeq) uncharacterized protein LOC111445522
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111445522
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmos03021
]
111445522
03019 Messenger RNA biogenesis [BR:
cmos03019
]
111445522
Transcription machinery [BR:
cmos03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
111445522
Messenger RNA biogenesis [BR:
cmos03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
111445522
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUFIP1
FKBP15
Motif
Other DBs
NCBI-GeneID:
111445522
NCBI-ProteinID:
XP_022939720
UniProt:
A0A6J1FNJ1
LinkDB
All DBs
Position
Unknown
AA seq
608 aa
AA seq
DB search
MFRPPAASSQQLPNSSLANSANGLQNPIQIQPQNQAPFCNPNAHLNNLHGNPVPNMPPPM
FQPGLMMNLQNPLMALPNNPLGASPFAPGHMGFANSAANFPVQGQFNMLPNVNQMNMNSC
LPLAQFFGQNMPNLVQQLTQNMGLTNGQFCLPFQNMNQHVIPGQMLNMSSQVPSHASYGA
PNQQAVPMPFQNPALSTIQPFGVNQAMHPVNQNPQNFIPQAMGGAGSNQLPGSAPPLQGN
STMPFNSPTQPQQARNLQSPAFVGSQGNSSISDGGNGSNSFSNNLAHRNFTRNSNKGFQK
HQAHHMKNEKKKFGVPGGPKGKGFHNERRNKFGDANSTEHVKDQKRSLSLVYTDQEILQW
REARRKNFPSSTNIQKKLTEKQTDCTLVDKEAQLLRQELKEILAKQAELGVEVAEIPQEY
LSYSEKCDDNKRHGDLSTMGEEAEGASTGKEKARNRFNKRRRPEKKNRSRKKEKPDKHLS
NKSPLKKREPTLYQKLLRADVKRDKSHMLQALRFMVMNSFFNEWPNKPLNFPSVIVKESG
SEIKVVDEKSLSTGSFNLQETNSSMVENTGSRGIASDNESDDDNSDNNEKFRGDGIPILE
EEEGEIID
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgtcctccagcggcttcttcacaacagttacccaattcatctctcgcgaattcc
gccaatgggcttcaaaatcccattcaaattcaaccccaaaaccaggctcccttctgcaat
cccaacgctcacttgaacaatctccatggaaatcctgttccaaacatgccgccccccatg
tttcaaccaggattgatgatgaatttgcaaaaccctctcatggcgttgcctaataatcct
cttggtgcttccccgtttgctcccggacatatgggatttgcaaattctgctgctaatttt
ccggttcaggggcagttcaatatgttgccgaatgtgaatcagatgaatatgaactcgtgt
ttgcctctagcgcagttttttgggcagaacatgcccaatttggttcagcaattgactcag
aatatgggtttaactaatgggcagttctgtttgccgtttcaaaatatgaatcaacatgta
attcctggacagatgttgaatatgtcgtcgcaagttccttctcatgcttcatatggtgct
ccaaatcaacaagctgttccaatgccttttcagaatcctgccctctctacaattcagcct
tttggtgtcaatcaggcaatgcaccctgttaaccaaaatccccaaaacttcattccacag
gcaatgggtggtgctggatcaaatcaattgccgggttcggctccaccgttgcaagggaac
tcgaccatgccgtttaactctccgacgcaaccacaacaagccaggaacctgcagtcacct
gctttcgttggttcacaggggaattcttcaataagtgatggtggaaatggatcaaattcc
ttttcaaataatttagctcacaggaatttcacgaggaactcaaacaaaggatttcagaag
catcaagctcatcatatgaaaaatgaaaagaaaaagtttggggttcctggcggaccgaaa
ggaaaaggttttcacaatgagaggaggaacaaatttggtgatgctaactccacagaacat
gtgaaagaccagaaaagatctctttctttggtctatacggatcaagaaatcctgcaatgg
cgtgaagcacgccggaagaatttcccatcatcaaccaacatacagaagaaactcaccgaa
aagcaaaccgactgcacattggttgataaggaggctcagcttttgcgacaagaactcaaa
gagattttagcaaagcaggctgaattaggagtggaagtagcagaaataccacaagaatac
ctttcatattcagaaaaatgtgacgataataaacgacacggagatctatcgacaatggga
gaggaagcagaaggagcctcaacagggaaagaaaaagctcgaaacaggttcaacaagagg
cgaagacctgagaaaaagaaccgttcgagaaagaaagaaaaacccgataagcatttatca
aacaagtcgccattaaagaagagagagccaacattataccagaagctgttgagagcagat
gttaagagagacaagagccatatgttacaagctttgagattcatggtgatgaattctttc
ttcaatgaatggcccaataaacccttgaactttccttcagtcattgtcaaagagagtgga
agtgagatcaaggtggttgatgagaagtctctatctactgggagcttcaatctccaagag
accaacagttcaatggttgaaaacactggtagtcgtggcattgccagcgataacgaaagc
gacgatgacaatagcgataacaatgagaagttcagaggagatggaataccgatactcgaa
gaggaagaaggtgaaattatcgattaa
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