Cucurbita moschata (crookneck pumpkin): 111445586
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Entry
111445586 CDS
T05248
Name
(RefSeq) replication factor C subunit 3-like
KO
K10756
replication factor C subunit 3/5
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03030
DNA replication
cmos03410
Base excision repair
cmos03420
Nucleotide excision repair
cmos03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111445586
03410 Base excision repair
111445586
03420 Nucleotide excision repair
111445586
03430 Mismatch repair
111445586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmos03032
]
111445586
03036 Chromosome and associated proteins [BR:
cmos03036
]
111445586
03400 DNA repair and recombination proteins [BR:
cmos03400
]
111445586
DNA replication proteins [BR:
cmos03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
111445586
DNA Replication Termination Factors
ELG1-RFC complex
111445586
Chromosome and associated proteins [BR:
cmos03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
111445586
DNA repair and recombination proteins [BR:
cmos03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
111445586
Check point factors
HRAD17(Rad24)-RFC complex
111445586
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_22
AAA_assoc_2
RCF1-5-like_lid
AAA_11
AAA_16
ATPase_2
AAA_5
AAA_14
AAA_lid_RFC1
DUF815
nSTAND_NTPase5
AAA_7
AAA_24
RuvB_N
AAA_30
bpMoxR
nSTAND3
AAA_19
ResIII
DNAX_ATPase_lid
AAA_3
SLFN-g3_helicase
TniB
AAA_28
TIP49
AAA_18
AAA_2
Mg_chelatase
nSTAND6
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
111445586
NCBI-ProteinID:
XP_022939828
UniProt:
A0A6J1FMN6
LinkDB
All DBs
Position
Unknown
AA seq
363 aa
AA seq
DB search
MSEAIAVMDIDDDNGNNEDEKSVEGKNVAGPADAPDGKAIPWVEKFRPKSLADVAAHRDI
VDTIDKLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGTNYHNMILELNASDDRGIDVV
RQQIQDFASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV
NKIIPALQSRCTRFRFAPLDNVHVTERLRYVIEAERLDVTESGLAALVRLCTGDMRKALN
ILQSTHMASQHITEEAVYLCTGNPLPKDIEQISFWLLNEPFSDSFKRIYEIKTRKGLALV
DIVREVTLFVFKIKMPSDVRVQLVNDLADIEYRMSFGCNDKLQLGSLISSFTRARSALVA
AAQ
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaagcaatcgccgtgatggatattgacgacgataatggcaacaacgaagatgaa
aagtcagtcgagggcaaaaacgtcgccggtcctgcagacgcacccgacggtaaagcgata
ccctgggtcgagaagttccggcccaagtctctcgccgatgttgctgcccaccgcgacatt
gtagacaccatcgacaagctgaccagtgagaataggctgccacatctcctgttgtacggc
cctcctggcactggcaagacatcaaccattctagcggttgctcgcaagctttatggaaca
aactaccacaacatgatactggagctgaatgcatcagacgatagagggatcgatgttgtt
agacagcagattcaagattttgcaagtacccaaagcttttcatttggggcaaaagcatct
gtaaaattggtactattggacgaggcagatgccatgacgaaagatgcacagtttgctttg
cgtcgagtaattgagaaatacacaaaaaatacacggtttgctcttatttgtaatcatgtc
aataagattattccagcgttacaatcaaggtgtacccgttttcgatttgctccccttgat
aacgttcatgtcactgaacgactcagatatgttattgaggctgagaggttggacgtaact
gagagtggcttagctgcccttgttcgactttgcactggtgatatgagaaaggctttaaat
attctgcagtcaacgcatatggcttcccagcatattaccgaagaagctgtctatctctgc
acaggaaatccattgcctaaagacatagagcaaatatccttttggctgctgaatgaacca
ttttctgacagttttaagcgaatatatgaaataaagaccagaaaaggattggctttggtt
gatatagtgagagaagtcactctgtttgttttcaagatcaagatgccatcggatgtcaga
gttcagttggttaatgatctggctgacatagagtacaggatgagtttcggatgcaatgac
aagttacaactcggatcgctcatctcatcttttacccgagctagatctgcacttgtcgct
gctgcacagtag
DBGET
integrated database retrieval system
