Cucurbita moschata (crookneck pumpkin): 111445771
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Entry
111445771 CDS
T05248
Name
(RefSeq) SWI/SNF complex subunit SWI3C-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111445771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmos03021
]
111445771
03036 Chromosome and associated proteins [BR:
cmos03036
]
111445771
Transcription machinery [BR:
cmos03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111445771
Chromosome and associated proteins [BR:
cmos03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
111445771
PBAF complex
111445771
GBAF(ncBAF) complex
111445771
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Ig_CycH
ZZ
Motif
Other DBs
NCBI-GeneID:
111445771
NCBI-ProteinID:
XP_022940007
UniProt:
A0A6J1FIF8
LinkDB
All DBs
Position
Unknown
AA seq
806 aa
AA seq
DB search
MPASPSFPSGSRGKWKKKKRDTQIGRRNNYGNSNNNGSNKHDDDDEDEDLATVENQEMER
DNDDSEDPQPTPNLSLQETELLSDDKMRVSEFPQVVKRAVTRPHSSVLAVVAMERANQSK
VLSGNPLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPSIMEGCGVVKRF
GSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVAKYMENPEK
RVTVSDCQGLVNCVSNDDLTRIVRFLDHWGIINYCAPTPSCEPWNRSSYLREDMNGEIHV
PSAALKPIDSLIKFDKPKCRLKAVDIYSARSCHDDNDDLCDLDNRIRERLAENHCSSCSR
TVPIVCYQSQKEVDVLLCTDCFHEGKYVAGHSSIDFLRVDMTKEYGELDSENWTDQETLL
LLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGILENVDVPGVPLSSNSSHGKD
NEKSHSNMNGNVAGSSSQDNKEMHDRLPFANSGNPVMALVAFLASAIGPRVAASCAHASL
AALSEDSAASSGSIFQVEGSVNPSRTNVEVTHGRDGGSYGKLPNSVKLKDENKAETEVTL
LSAERVKVAAKVGLAAAATKAKLFADHEEREIQRLSANIINHQLKRLELKLKQFAEVETF
LMKECEQVERTGQRFVAERARMLGVQFGAAGVSSPASLPGVIPPVVNNNRVSSPASRPNV
ISPPPSQPSVSGYGNNQPLHPHMSYVPRQSMFGLGQRVPLSAIQQQQQQLASTTSSNAMF
NGPSNAQASLSHPMMRPVTGSSSGLG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgccagcatctccttccttcccatctggatctcgcggaaaatggaagaagaagaagagg
gacacgcaaattggccgtagaaacaactatgggaatagtaataacaacggcagcaacaag
catgatgatgatgatgaagatgaagatcttgccactgttgaaaatcaggaaatggaacgc
gataacgacgattctgaggaccctcagccgacgcccaatttgagtcttcaagagactgag
ctcttgtcggatgataaaatgcgagtctctgagtttcctcaggtggtcaagcgggctgtc
actcggcctcactcttctgtgttggctgttgtggcaatggagagggcaaatcaaagtaag
gtgctgtctgggaatcccttgattttggagaatgtgtcttacgggcagctgcaggcgctg
tctgctatgcctgcggatagtccggctttgctggatcaagagagggtggaggctgggaat
gcggcgtatgtgataactccaccatcgattatggaaggttgtggcgtggtcaagaggttt
gggagtagagttcatgttgttcctatgcactcagattggttttcacctgccacagtgcat
cgactcgagagacaagttgttccacattttttctctgggaaattgcctgaccgcactcct
gagaagtatatggaaatccgaaacttcgttgttgccaaatacatggagaatcctgagaaa
agggtcacagtttcagactgccaaggattggttaattgtgtcagtaatgacgatttaact
cgaattgttcgatttcttgatcattggggtattattaattattgtgccccgacacctagt
tgtgaaccatggaatagaagttcatacttgagagaagatatgaacggtgagattcatgtg
ccatcagctgctttgaagcctattgatagcttaatcaaatttgacaaaccaaaatgtagg
ctcaaggcagtcgatatctattcggcacgttcatgccatgatgacaatgatgatttatgt
gatttggataacagaattcgggagcgtctagctgaaaatcattgtagctcgtgttctcga
acagttcccattgtatgctaccaatcacagaaggaggtagatgttttactttgcaccgac
tgcttccatgaaggaaaatatgttgctggtcattcgagcatcgattttctgagggtggac
atgacgaaagagtatggtgaactagatagcgaaaattggaccgatcaagaaactctattg
cttttagaggcgatagaattgtataatgagaattggaatgaaataacagaacatgttggg
tccaagtctaaagctcaatgcattatacattttctccgtctatcggttgaagatggtatt
ctagaaaatgttgatgtgcctggcgttcctctctcatccaattcttcacatggaaaagat
aacgagaagtcacattcaaatatgaatggaaatgtagcaggatcttcctctcaagacaat
aaagagatgcatgatagactcccatttgctaattctgggaacccagtcatggcgttggtt
gcttttcttgcatctgctattggaccaagagttgctgcatcatgtgctcatgcatcctta
gctgcattatctgaggacagtgcagcttcttctgggagcatatttcaagtggaaggttct
gtgaatcctagtaggacgaatgtggaggtcacacatggcagagacggtggctcctatgga
aagcttccaaattcagtcaagctaaaagatgagaataaggcagagacagaggtaacacta
ttatctgctgaaagagttaaagttgcagcaaaagtaggtcttgctgccgctgcaacaaag
gctaaattgttcgcagaccacgaagaacgagaaatccaacggttgtctgctaatattata
aatcatcagttaaaaagacttgagttgaagctgaagcagtttgcagaagtagaaaccttc
ttgatgaaggaatgcgaacaagtcgagaggacagggcagagatttgttgcagaacgagct
cgaatgttaggtgtccaatttggagctgctggagtcagctcacctgcgagtttaccgggg
gttattcctcccgtggtaaacaacaatagggtgagctcacctgcgagtaggccgaatgtg
atctcgcctccaccatcccagccgagcgtttcggggtatggcaacaaccaaccacttcat
ccccacatgtcgtacgtgcccaggcagtcgatgtttggcttggggcaaagggtacctctg
tcagcaattcagcagcaacagcagcagctggcctcaacgacttcgtctaatgctatgttc
aatggcccgagcaatgcacaggcttctctcagtcacccaatgatgaggccagttactgga
tccagctctggattaggctga
DBGET
integrated database retrieval system
