Cucurbita moschata (crookneck pumpkin): 111445776
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Entry
111445776 CDS
T05248
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
111445776
Enzymes [BR:
cmos01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
111445776
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
111445776
NCBI-ProteinID:
XP_022940017
UniProt:
A0A6J1FIG7
LinkDB
All DBs
Position
Unknown
AA seq
712 aa
AA seq
DB search
MSTDLREMKKSAFSILSDSLKIFWLFSSLFFYVYGPFIPPTTKDPAFSTTPDTNGHGPDG
HNPDGHSPDGHSPNASVSLLQLHIQEQYVVMENEIIAVTISNPMGFVTGIQYHGIENLLD
VTNPEDDRGYWDVVWNTAGAKGTKGMFDRIEATDFKVIVQNDEQIELSFSRTYNSSSGDD
VVPLNVDKRFVILRNSSGFYSYAIYEHLKDWPAFNIDNTRIAFKPRKDKFRYMVVADERQ
RFMPLPDDRKPPRGVALEYPEAVLLVDPIEPEFKGEVDDKYQYGCESKDTRVHGWISNDP
PIGIWQITASEEYRSGGPLKQVLTSHVGPTSLTVFHSAHYAGAAMVIRFGSNEAWKKVYG
PVFIHINSLPEKEDPLRLWQNAKEQMAAEVQSWPYNFPASKDFIKADQRGTVTGTLMIHE
RYVSNESIPASGAYVGLALPGELGSWQTESKGYQFWSRADENGHFTLENVLSGNYSLNGW
VYNFISEYQYDAFITVTPGSDIDVGELVFEPPRDGPTLWEIGIPDRTAAEFYVPDPSPKF
INKLFVNHSDKFRQYGLWERYAELYPKEDLVYTVDHSDYKKDWFFAQVNRKIDDNNTYVG
TTWKIEFKIDSPDTHGTYKLRLALATAHAAELQVRVNDAQTVTPLFTTGVIGKDNTIARH
GIHGLYRFYSVDIPGSELVAGNNTIFLTQTNDHGPFVGIMYDYIRLEGPLTS
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacagatttgagggaaatgaaaaaaagtgcattttcaattttgtccgactccctc
aaaatattttggctcttttcttcccttttcttttacgtttacggacccttcatccccccg
acgacaaaagaccccgccttctcgaccacgcccgacaccaatggacacggccccgatgga
cacaaccccgatggacatagccctgatggacacagccccaatgcatcagtgtctctgttg
caacttcacatccaagaacaatatgttgtgatggagaatgaaataattgcagtgacgata
tcgaatccgatgggatttgtcaccggaatacaataccatgggattgaaaacttgcttgat
gtgaccaatcctgaagatgatagaggatattgggacgttgtttggaacaccgcaggagcg
aaaggaaccaaaggcatgtttgatcgaattgaagcaacagatttcaaggtaatcgtacaa
aatgacgaacagatagaactctcattcagcagaacttacaattcatcctccggagacgac
gtagttcctttgaatgtcgacaaaaggttcgtgatacttcgaaattcatcaggattctat
tcgtacgccatttacgaacacttgaaagactggccagcgtttaacatcgacaacaccaga
atcgcattcaagccgcgaaaagacaagtttcgatacatggtagtagcagatgagagacag
agattcatgcctttaccagacgatcggaagccaccccgaggagtagccctagagtatcca
gaggccgtcctccttgtggatcctatagaacccgagttcaagggagaggtggatgacaag
taccaatacgggtgcgaaagcaaagacactcgggttcacgggtggatatccaacgacccg
cccattggcatttggcaaatcacagccagcgaggagtatcgctccggtgggcccctcaaa
caagttctcacctcccatgtgggtcccacctcccttacggttttccatagcgctcattac
gcaggagcggctatggtgatacggtttggaagtaacgaggcatggaagaaggtgtacggc
cctgtctttatacatatcaattccttgcctgaaaaagaagatccactcagactttggcaa
aatgctaaagaacagatggctgctgaagttcaaagctggccttacaatttccctgcgtct
aaggattttatcaaagcagaccaacgagggactgtcactggcacattgatgatccatgag
agatatgtgagtaatgaatccatacctgcaagtggtgcatatgtggggctggcacttccc
ggggaacttggctcctggcaaacagaaagcaagggctaccaattctggagcagagcagat
gagaatggacatttcactttggaaaatgttctcagtggaaattatagtcttaatggatgg
gtatataattttatcagcgagtaccaatatgatgctttcatcactgtaaccccaggcagc
gatatcgatgtgggtgaacttgttttcgagcctccaagagatggtccaacattgtgggaa
ataggcattccagatcgtactgctgcagaattctatgtaccagatcctagtcccaagttt
attaataaactttttgtcaatcattcagataagtttaggcagtatgggttatgggaaaga
tacgcagaattatatcctaaggaggacctagtttatacggttgaccatagtgactacaaa
aaagattggttctttgcacaagttaacaggaagatagacgacaacaacacatatgtagga
actacttggaaaattgagttcaaaattgacagtccagatacacatggaacatataagctg
cgtcttgcattggccactgcacatgctgcagaattacaagttcgagtgaatgatgcacaa
acagttaccccgttattcacaactggagtaattggaaaggacaacactatagctagacat
ggaattcacggtctgtaccggttttacagtgtcgatattccgggcagtgagcttgtggcg
ggcaacaatacaatttttcttacacaaacaaatgaccacggtccttttgttgggattatg
tatgattatattcgtttggaaggacccttaacttcctaa
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