Cucurbita moschata (crookneck pumpkin): 111445933
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Entry
111445933 CDS
T05248
Name
(RefSeq) serine/arginine-rich splicing factor RS40-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111445933
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmos03041
]
111445933
Spliceosome [BR:
cmos03041
]
Common components
Common spliceosomal components
SR proteins
111445933
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RNA_bind
RRM_5
Nup35_RRM_2
RRM_Nup35
DUF2129
Motif
Other DBs
NCBI-GeneID:
111445933
NCBI-ProteinID:
XP_022940255
UniProt:
A0A6J1FQ19
LinkDB
All DBs
Position
Unknown
AA seq
377 aa
AA seq
DB search
MKEILGIRTVNAVEGMKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDE
RDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGSRRSSTNTRPSKTLFVIN
FDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLLDRVISV
EYAVRDDDEKRSGYSPDRKCDRSPDRKRRSPSPFRRERGSPDYGINGISRSPYKKQRASP
DYGSRRSPSPYQRDMERGSPDYGRRRSPNPSPYSRRERERSTDHVRAARHSSPHQREGAN
EDPVPNRICSPYERERESPTGERRSSYSPRDRERSNPDNGHDQRLNTVGEPGDSPSFGGT
ESPKHRGYSSRSPRAEE
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagatattaggcattcgaacagtgaatgctgttgaaggtatgaagccaattttt
tgtggaaactttgagtatgatgctcgacagcctgatctagaaagactttttagtagatat
ggcaaagttgatagagtagatatgaaatctggttttgcttttatctacatggaggatgag
agagatgctgaggatgctatccgtgcacttgatcggagagagttcggccgaaaaggccgc
agactacgtgttgagtggaccaaacaagaacgtggcattagaagaccaggtggaggtgga
ggaggctcaaggagatcctctactaatacaaggccttcgaagactttatttgttattaac
tttgacccatatcatactaggacaagggatttggagaggcactttgatccttatggtaag
atattgagtgtaaggatccgaaggaattttgcatttgtccagtatgaattgcaggaagat
gccactagagcattggagcttacaaatatgagcaaattgctagatcgagtgatttcggtg
gaatatgctgttcgagatgatgatgagaaaagaagtggatatagtccagataggaaatgt
gataggtctcctgatagaaaacggcgatccccaagtccctttagaagagagcgaggaagc
cctgattatggcatcaatggtattagccgcagtccatataagaaacaaagggctagtcct
gattatggaagtcgtcgtagtccaagtccttatcagagagacatggagaggggttctcct
gattatggccgtcgtcgtagcccgaatcctagtccttatagtaggagggagcgagagaga
tcaactgaccatgttagggccgctagacacagttctcctcatcagagggaaggagcaaat
gaagacccagtccccaaccgaatttgcagtccttatgagagagagagggagagccctact
ggtgaacgtcgcagtagctatagtcctcgtgatagagagagatcaaaccctgacaatggt
catgaccaacggctaaatacagtaggagaacctggtgatagccccagttttggtgggact
gagagcccaaagcatcggggatatagcagccgttcccctcgagctgaggaatga
DBGET
integrated database retrieval system
