KEGG   Cucurbita moschata (crookneck pumpkin): 111445938
Entry
111445938         CDS       T05248                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    111445938
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cmos03021]
    111445938
Enzymes [BR:cmos01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     111445938
Transcription machinery [BR:cmos03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     111445938
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5 DUF2002
Other DBs
NCBI-GeneID: 111445938
NCBI-ProteinID: XP_022940261
UniProt: A0A6J1FHZ2
LinkDB
Position
Unknown
AA seq 1193 aa
MGTSGAKDDIEMNSEPEDLSPGTDMDTDDDDYSEPVNIHDLGETFLKDFCKKSSMAFFNE
YGLISHQLNSYNDFIKSGIQKSFDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVTLDKP
KFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGQDQYVDKD
LLSQDNRDIFIGRLPVMVNSDLCWMKDDQKRDCEFDHGGYFLIKGAEKIFIAQEQICLRR
LWISNNQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFAL
GVSSDREIVDLIDFGREDPTVLNILFASVRVVDNDDKWKDFRRGKRALNFLENEVKKTSF
PPAEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCLLQAYTGRRKCDNRDDFRNKRFELAG
ELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYFDASIITNGLSRAFSTGAWAHS
FKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTPD
GENCGLIKNLSITGLVSLNTLKPVVPTLFRCGMENVVDDTSTSLSGKHRIFLNGEWVGVC
EDSLSFVTKVRRKRRRNLLLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNRIDKSK
GESYTFQSLLDKGIIELIGTEEEEDCRTAWSIKHLTEDQGTSKYTHCELDTSFLLGLSCG
LVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLG
TPGYLSSHTGILPKPEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHTRSYK
AEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAESG
ADHSIKLKHTEKGMVQKVVLSSNDDGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLE
SQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIASGGSLKYATPFSTPSVDA
ITDQLHRAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPL
TRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVANVIQ
RSVAGGRKIRGPYCRVCESVDDIVRVNVPYGAKLLCQELFSMGINLKFETQVC
NT seq 3582 nt   +upstreamnt  +downstreamnt
atggggacatcaggcgcaaaggacgatatagagatgaatagtgagccagaagacttatca
cctggaactgatatggatacagacgatgatgattattctgagccagtcaacattcatgat
ctaggggaaacatttttaaaggatttctgtaagaagtcatcaatggcattttttaatgag
tacggccttatcagtcaccaactcaactcgtacaatgacttcataaaaagtggcattcag
aagtcctttgattactttggtgagatcgtagttcagccaggatatgacccctcaaagaaa
ggagatggagaatggagatatgcttcagtgaagtttggcaaggtaactcttgataagcca
aagttctggggtggtgcagcaagtggaaaagagtataacatgcttcctaggcacgctcga
ctacaaaacatgacttattcctcaaggatgaaaatgaatattaatgtagaggtgtatact
caaaggttagtcagaagtgataaattcaaaactggacaagatcaatatgtcgacaaggat
ctcttaagtcaagataacagggatatatttataggcaggctgcctgtgatggtgaattct
gacctttgctggatgaaggatgatcagaaacgtgactgcgaatttgatcatggaggttat
tttttaatcaaaggtgcagaaaaaatatttattgctcaagagcaaatttgtttgagaaga
ctctggatttctaataatcaaggttggactgtggcatatagatcagaagttaagagaaat
agactaattattagactagttgaaaattccaagtctgaagaactaaaaagcaaggagaaa
gtcctcaatgtatatttcttgtctacagaaattcctgtgtggattttattctttgcactt
ggtgtttcttcggacagagaaatagtagatttaatcgactttggcagagaggatccaact
gttttgaatattctctttgcctctgttcgtgtagtcgataatgatgataagtggaaagac
tttcgaaggggtaaaagagctctgaattttttggagaatgaggttaaaaagacgagcttc
ccacctgctgaaaaaattgaagattgcttgaacctttatctttttgccagcttgaaaggc
ttaaagcagaagtgtcgtttccttggttatatggttaaatgtctcctgcaagcctatact
ggccgtaggaaatgtgataatagggatgatttccgcaataagaggtttgagttggctgga
gaattgcttgaaagagagattaaagtacatatcgcacatgcacgtaggcgtatggaaaag
gctttgcaaagggacctctatggagatcgtgatgtgcgtccaattgaacactattttgat
gcttccataatcactaatggtctatcccgagcattctctactggagcatgggcacattca
ttcaagaggatggaaagaatttcaggtgtggtggcaacgcttggtcgtgctaatcccctg
cagacaatggctgaattgaggagaacacgtcaacaggttgcatacactgggaaagttggt
gatgctagatacccgcatccttctcactggggaagggtttgctttctctccaccccggat
ggtgaaaattgtgggcttattaaaaatttatccatcacaggacttgtaagcttaaacaca
ttgaagcccgtagttcccaccttgtttcgttgtgggatggagaatgtggtggacgataca
tctacttctcttagtgggaagcacagaatttttctcaatggggaatgggttggagtttgt
gaagattccctttcatttgtaacgaaagtgagacgcaagcggcgaaggaatctgttactg
catcaggtagaagtcaaaagagatgaacaactgaaagaagtacgtatattttccgatgct
ggaaggatattacgtcctctcttagttgtagagaacttaaacaggattgataagtctaag
ggggaaagctacacttttcaatcccttttggacaaaggaataattgaacttattggaaca
gaagaagaagaagactgtcgtacagcttggagtattaagcatcttacggaagatcaaggg
acttcgaaatatacccattgtgaactggatacgtcatttttattaggtttaagctgtgga
cttgtcccttttgcaaatcatgaccatgctaggagggctctatttcaatcccagaaacac
tctaatcaagctattggattttcaacaaccaattctaattttcgtgtagatactttatct
caccagttacactatccacaaaggccgctttttcgtactatgactgctgattgccttggg
acacctggatacctgtcatctcacactggcatactaccaaaacctgagttctataatggt
cagaacgctattgtggcagtcaatgttcacctgggttacaaccaagaagattcattagta
atgaaccgggcctctctggagcgtggcatgtttcggtctgagcatactcggagctacaag
gctgaagttgataataaagaatcttccgaaaagaggaggaaatccgatgatgcaataaat
tttggtaagactcaaagtaaaattggaagagttgacagcttggacgatgatggcttccct
tacatcggtgcaaacttgcaaagtggagacattgtcattggtaggtgtgcagaatctggg
gccgatcacagtatcaaactgaagcacactgagaagggtatggttcagaaagttgtgctc
tcttctaatgacgatggcaagaattttgctgttgtaagcctgagacaggttcgttcacca
tgtcttggagacaagttttccagtatgcatggacaaaagggagttctgggctttttggag
tctcaagagaatttccccttcaccattcaggggattgttccagatatcgttattaacccg
catgcttttccttcacgacagactcctggtcaattattggaagctgctctagggaaaggg
attgcttctggcggttcgctgaaatatgcgactcctttttccactccttctgttgatgcc
attacagaccagcttcacagggcagggttttcaagatgggggagtgagagggtgtacaat
ggtcgaactggtgaaatgatgcgctcactcatattcatgggtccgacattctaccagcgc
ttaattcacatggctgaagacaaggttaaatttcgtaacactggacctgtccaccctctc
acacgacaaccggttgcggacaggaagcgttttggtggaatcaaatttggggagatggag
cgtgactgtcttatagctcatggcgcctcggccaacttacacgaacgcttgtttaccctc
agtgactcctcccagatgcacgtttgccagaaatgtaaaaatgttgcaaatgtgatccaa
cgatcggtggcaggtggtcgtaagataaggggtccatactgtcgtgtttgcgagtcggtg
gatgacattgtgagggttaatgtaccgtatggagccaagttgttgtgccaggagctcttc
agcatgggcatcaatctcaagtttgaaacacaggtgtgttga

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