KEGG   Cucurbita moschata (crookneck pumpkin): 111446005
Entry
111446005         CDS       T05248                                 
Name
(RefSeq) UBP1-associated protein 2C-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111446005
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmos03019]
    111446005
   03041 Spliceosome [BR:cmos03041]
    111446005
Messenger RNA biogenesis [BR:cmos03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     111446005
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     111446005
Spliceosome [BR:cmos03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    111446005
SSDB
Motif
Pfam: RRM_1 RRM_7 Phage_connect_1
Other DBs
NCBI-GeneID: 111446005
NCBI-ProteinID: XP_022940378
UniProt: A0A6J1FJY4
LinkDB
Position
Unknown
AA seq 439 aa
MDVVKKRKMDENGVPLTDSDDSLLKLSPEDARKIIERFTPDQLIDILQDAVSCHSDVLDA
VRSVADQDVAQRKLFIRGLGWDTTTDGLRKLFSIYGELEEAVVILDKATGKSKGYGFVTF
KHVDGALLALKEPSKTIDGRVTVTQLAAAGNTGSNSNAPDVSMRKIYVANVPIDMAADKL
LAHFVLYGEIEEGPLGFDKQTGKCRGYALFVYKKAEGAQAALVDPIKTIEGRQVSCKYAN
DGKKGKPGGSGPDGVQGSVGNQGNVHGDGMGMPSQAPMPGSMGGQYGGPGGLGSYGGFSG
GLHGPPQLGHNTLNSSLGPGLSSMGSQTQNSLNGTGGYGGGLGGGPYGGGYGGPGSTGFS
GLSAGPAGGQGSSGAGTGSGLYRLPPNSGGVPSNGYPDSLPYSLSSSSGYLNQHPHTTGT
SPAPRVPPGGMYPNVPPFY
NT seq 1320 nt   +upstreamnt  +downstreamnt
atggacgtcgttaagaagcgaaagatggacgaaaacggcgtccctcttaccgactccgac
gattctttgttaaaactttcaccggaagatgctcgcaagatcatcgaacggttcactccg
gatcaactcatcgacattcttcaagacgcggtttcctgtcattcggatgtgcttgacgca
gtacgttctgttgctgatcaagatgttgctcagcgtaagctctttattcgtgggcttggt
tgggacactacgaccgatggtctccggaagcttttttctatatatggcgaattggaagag
gccgtcgttattctagataaggccacggggaagtcgaaagggtatgggtttgttacgttt
aagcatgttgatggtgctctactggctttgaaagagccgagtaaaacgattgatgggcgt
gtcactgtgactcaattggcagctgcaggaaatactgggtctaactccaacgcccccgat
gtgtcgatgaggaaaatttacgtggctaatgtgccgattgacatggctgctgataaattg
cttgcgcattttgttctgtacggggagattgaggaagggcctttggggttcgataagcag
acggggaagtgtaggggttatgcattgtttgtctacaagaaggcggagggtgcacaagcg
gcgttggtggatccgattaagactattgaagggcgacaagtaagctgtaaatatgccaat
gatggaaagaagggaaagcctggaggttctgggcctgatggcgttcagggctctgttggt
aatcaaggtaatgttcatggagatgggatgggtatgccttcgcaggctccgatgcctggt
tcaatgggtggacagtatgggggacctggcggtcttggatcatacggtgggttttcagga
ggtctccatggtccaccacagcttgggcataatacgctgaactcgtcgttgggaccaggc
ttgtcttctatgggtagtcaaacacaaaattctctgaatggtactggtgggtatggtggt
gggcttggcggcggcccttacggtggtggatacggtggtcctgggtcaactggcttttct
ggtctgagtgctggtccagccggcggccagggaagttccggtgctggaacgggatctggt
ttgtacaggttgcccccgaattctgggggagttccttctaatggttatccagatagtttg
ccatatagtttatcgtcttcgtctggttatctaaatcagcacccacacaccacgggtaca
tcaccggcgccccgagtgccgcctgggggcatgtaccctaatgtgccgccattttattga

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