Cucurbita moschata (crookneck pumpkin): 111446055
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Entry
111446055 CDS
T05248
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmos04131
]
111446055
04121 Ubiquitin system [BR:
cmos04121
]
111446055
Enzymes [BR:
cmos01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111446055
Membrane trafficking [BR:
cmos04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
111446055
Ubiquitin system [BR:
cmos04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111446055
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-RING_UBOX
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-C3HC4_3
zf-RING_5
Rad50_zn_hook
CxC4
zf-Nse
zf-RING_16
VPS18_RING_C
Motif
Other DBs
NCBI-GeneID:
111446055
NCBI-ProteinID:
XP_022940469
UniProt:
A0A6J1FK80
LinkDB
All DBs
Position
Unknown
AA seq
305 aa
AA seq
DB search
MSSRNTHWCYRCEQPVQLRGRDMVCASCNGGFVQELDEMMERDPLDFFGANGHEYHNRRL
GLLELFSNFMRQRLIDRNDMRGRLESIPDHGSGFGPWLIFGGQIPVRLSGHGGFEAFFNG
VPGIGVSRSNGGDYFIGPGLEELFEQLSANDRRGPPPASRSSIDAMPVVKITQRHIRSNS
HCPVCQDKFELGTEARKMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSGGIHSSSGS
NNLSRNSRERENSRTNQGRRNPFSSLWPFRASSSDSNHSATTGSSSPALHESTQHQTGYS
GWPFD
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtaggaacacccattggtgttacagatgtgagcagccagttcaactccgtggg
cgggacatggtttgcgctagctgtaatggaggatttgttcaagaactcgatgaaatgatg
gaaagagatccccttgatttctttggagccaatggtcatgaataccacaatcggaggctt
ggactcctggagcttttctcaaactttatgaggcaacggttgatagacagaaatgatatg
aggggaaggttggaatctattccagatcatggttcaggatttggtccttggttgatcttt
ggtggccaaattcctgttaggttgtctggacatggtgggtttgaagccttttttaatggg
gttcctggaattggtgtgagtaggagcaatggtggtgattattttattggtcctggactt
gaagaattgtttgaacagctttcagcaaacgaccgacgcggaccacccccagcatctaga
tcttcaatcgatgcaatgcctgttgttaaaattacgcaaagacacatccgttcgaattca
cactgccctgtttgccaagataaatttgaattagggactgaagctaggaaaatgccatgt
gaccatatgtatcattcagattgtatagttccctggcttgtccagcacaactcctgccct
gtttgccgccaagagctgcctgcacaagggtcaggtggtatccacagctcgtctggaagc
aacaatcttagtcgaaacagccgagagagggagaatagtaggacaaatcaaggaaggagg
aacccattttcaagtttatggccattccgagcgtcaagttctgactcaaaccatagtgcg
accactggaagcagctcaccagccctacatgagagcacccaacaccaaacagggtattct
ggatggcctttcgactag
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