Cucurbita moschata (crookneck pumpkin): 111446310
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Entry
111446310 CDS
T05248
Name
(RefSeq) CCR4-NOT transcription complex subunit 9-like
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111446310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmos03019
]
111446310
Messenger RNA biogenesis [BR:
cmos03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
111446310
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
111446310
NCBI-ProteinID:
XP_022940835
UniProt:
A0A6J1FRT6
LinkDB
All DBs
Position
Unknown
AA seq
321 aa
AA seq
DB search
MSNLPQSLSMSAAFGGPGPGPSIPSASGAPPNKERKMASSEQLVLDLSNPDLRENALLEL
SKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVAS
HSDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTE
IIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALSE
QPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDATFNGCLRDDATTRRWLQQLLHN
VGMSRVPALQAGAGFDHMMVN
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatctccctcaatcgctctccatgagtgctgcgtttggaggtcctggtcctggt
ccgtccatccctagtgcctctggagctccaccgaacaaggagcgtaaaatggcttcttcg
gagcagttggtgctcgacctcagcaatccggatctccgggagaacgctctacttgaactt
tcgaagaagagggagctgtttcaagatttggccccattgttatggaactcttttggaacc
attgctgccttattgcaagagattgtatcaatatatcctgttctttcacccccaaatcta
acacctgcgcagtcgaatagagtttgcaatgctcttgctcttctccagtgtgtagcctct
cactcagatacaaggatgttgtttctcaatgctcacataccgttgtatttgtatcctttc
cttaacacaacaagcaagtcaaggccttttgagtacttgcgccttactagcttgggtgtc
atcggtgcgttggtgaaggtagatgatactgaagtaatcagttttcttctgtcaactgaa
ataattcctctatgcctgcgtaccatggaaatgggaagcgagttgtcaaaaacagttgca
acatttattgtgcagaaaattttgctggatgatgtggggttggattatatttgtactaca
gctgagcgattttttgctgttggtcgagttctggggaacatggtagcagctctttctgaa
caaccttcctctcgtctgttgaagcacataatacgatgttatcttcgattgtctgataac
ccgaaagcttgcgatgccttaaggagctgtcttccagacatgttgagagatgctactttc
aatggctgcctccgggatgatgcaaccactaggaggtggctgcaacagttgctacacaat
gtaggaatgagtagagttccagcacttcaggcaggggctggatttgaccacatgatggtg
aactag
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