Cucurbita moschata (crookneck pumpkin): 111446425
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Entry
111446425 CDS
T05248
Name
(RefSeq) pre-mRNA-processing protein 40A-like
KO
K12821
pre-mRNA-processing factor 40
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111446425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmos03041
]
111446425
Spliceosome [BR:
cmos03041
]
Complex A
U1 snRNP components
U1 related factors
111446425
Complex B
111446425
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
Motif
Other DBs
NCBI-GeneID:
111446425
NCBI-ProteinID:
XP_022941011
UniProt:
A0A6J1FJZ0
LinkDB
All DBs
Position
Unknown
AA seq
937 aa
AA seq
DB search
MDNLSQSSGGQFRPNIPAQPGQTFISSSAPQFQSAGQNISSSNVGIPAGQVQPHQYPQSV
PQFVPRPSHRGYITPLSQGIQMPYVPTRSLTSVPPQSQQNVSAPNNQMHGLGSHGLFISS
PYTPMSQMHVPVGVGNSEPLMSSVSQATNPVSQIEQANQHSSVSTVKLAANVPVFNHPSD
WQEHASADGKRYYYNKKTKQSSWEKPLELMTPLERADASTVWKEFTSPYGRKYYYNKVTK
ESKWTMPEELKLAREQAQKESVQGTQTDMAVTTSQPTPTVGLFHAETPAISTISSSISPT
VSGVALSPVPAALFVSGPPAVVHVNASSMTAFESLASQDVKNPVDGTSTEDIEEARKRMA
VAGKVNETVLEEKYADDEPLVFANKLEAKSAFKALLESVNVQSDWTWEQAMREIINDKRY
RALKTLGERKQAFHEYLGHRKKLDAEERRIRQKKAREEFIKMLDESKELTSSTRWSKAVS
MFENDERFKAVERSRYREDLFETCIVELEKKEKERAAEEHKKNITEYREFLESCDYIKVS
SKWRKVQDRLEVDDRCLYLEKLDRLLIFQDYIRELEKEEEEQKKIQKGRLRRIERKNRDE
FRQLMEEHITAGVLTAKTFWRDYCLKVKELPQYQAVASNISGSTPKDLFEDVLKELKTKY
HKEKAQIKDVMKAAKVTITSSWTFDDLKAVIEEGAPLALSDINFKLVYEDLLERAKAKEE
KEAKRRQRLADDFSRLLQLFKEISASSNWEDSKQLFEESEDYRLIGEETFAKEVFEEYVV
HLQEKAKEKERKGEEEKAKKEKECEEKEKERKEKEREREKEKGRVKKDETDSENIDANET
RVYREKKREKNKDRKRRKRHHSATDDGGSNKDEREESKKSCKRGSDRKKSRKHAYSPESD
SESRHRRHKREHRDGSCRNDGHDELEEGELGEDGEIQ
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggataatctatctcagtcttcaggcggacagtttcgaccaaatatcccagcacaacca
ggccagacgttcatttcctcatctgccccacagttccagtcagcagggcagaatatatct
tcttcaaatgttggaattccagctggtcaagtccagccacatcagtatcctcaatcagtg
ccacagtttgtgccaaggccaagccatcgaggctatatcactcctttgtcccagggtatt
caaatgccttatgttccgacaaggtctcttacttctgttccacctcagagtcagcaaaac
gtgtctgcaccaaataatcaaatgcatggtctgggttctcatggactatttatttcttca
ccatatactccaatgtcacaaatgcatgtacctgttggagttggtaatagcgaacctttg
atgtcttctgtaagccaggctacaaacccagtctcacagattgagcaagctaaccagcat
tcttcagtttctaccgtaaagctagctgctaatgttcctgtcttcaatcatccatctgat
tggcaagagcatgcatcagctgatggaaaaagatattattacaacaaaaaaaccaaacag
tccagttgggagaagccattggaacttatgacaccacttgagagagctgatgcatcaact
gtgtggaaggaatttacatctccatatggaagaaagtactattacaataaggtgacaaaa
gaatcaaagtggaccatgccagaagaactgaagttggctcgcgagcaggctcagaaagaa
tctgtccaaggaacacaaacagatatggctgttacaacgtctcaacctacacctactgtt
ggtcttttccatgctgaaacgccggcaatttctaccattagctccagcatttctccaact
gtttctggggttgcattgagtccagttccagctgctctttttgtttctggtcctcctgct
gtggtccatgtcaatgcttcgtcaatgactgcttttgaaagccttgcatctcaagatgta
aaaaatcctgttgatggaacttctacggaggacattgaggaagcaaggaagagaatggca
gttgcaggaaaagttaatgagactgtcttagaggaaaaatatgctgacgacgaaccattg
gtatttgccaacaagctggaggcaaagagtgcatttaaagcgcttctggaatctgtaaat
gtgcagtctgattggacgtgggagcaggctatgcgagaaataattaatgacaaaagatat
cgcgccttgaaaactcttggtgagcggaagcaagctttccatgagtatttaggacataga
aaaaagttggatgcagaagaaagacgcataagacagaaaaaagctcgtgaggaattcatc
aagatgttggatgagtccaaggaactcacatcatctaccagatggagcaaagctgttagt
atgtttgagaatgatgaacggttcaaagccgttgaacgttctagatatcgggaggatctt
tttgaaacctgcatagtggaacttgagaagaaggaaaaagaaagggctgcagaggagcac
aagaaaaatattactgaatatagggaatttctcgagtcttgtgattacataaaggtgagt
agcaaatggcggaaagtacaagatcgattggaagttgatgatagatgcttataccttgag
aaacttgatcgcttgcttattttccaggactatatacgtgagttggaaaaggaggaagag
gaacagaagaagatacaaaagggacgtttgcgaagaattgaaagaaaaaaccgcgatgag
ttccgccaactcatggaagaacacattactgctggtgttcttacagctaagaccttttgg
cgtgattactgtttgaaggttaaggagttgcctcagtatcaagctgttgcttcaaatata
tctggctcaactccaaaggacttgtttgaggatgttctgaaggaattaaaaactaagtat
cacaaagaaaaggctcagataaaagatgtgatgaaggcagcgaaggttaccatcacttca
tcatggacatttgatgaccttaaagctgtcattgaagagggtgcccctcttgcactttca
gatataaattttaagcttgtatatgaggatttactagaaagagccaaagcaaaggaggag
aaagaagccaaaaggcgtcaacgtttggctgatgacttctcaagactgcttcagttattc
aaggagatttcagcttcttccaactgggaggatagcaaacagctttttgaagagagtgaa
gactacagattaattggggaagagaccttcgcgaaggaagtttttgaggaatacgtagtg
catttacaagaaaaggcaaaagaaaaggaacgcaagggtgaggaggagaaggctaaaaag
gaaaaagaatgcgaggaaaaggagaaagagcgaaaggagaaggaaagagaacgtgaaaaa
gaaaaggggcgtgttaagaaggatgaaactgatagcgaaaatatagatgcaaacgaaact
cgtgtctacagagaaaagaaaagggaaaaaaacaaagacaggaaacgtcggaagcggcat
catagtgccactgatgatggtggttctaataaagatgagagagaggagtctaagaagtct
tgcaaacgtggcagtgaccgaaaaaagtcaaggaagcacgcatattcaccagaatcagac
agtgagagtaggcacagaagacacaagagagaacatcgagatggttcatgtagaaatgac
ggacatgatgaacttgaagagggggagcttggagaggatggggaaattcaatag
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