KEGG   Cucurbita moschata (crookneck pumpkin): 111447152
Entry
111447152         CDS       T05248                                 
Name
(RefSeq) protein RDM16-like isoform X1
  KO
K12843  U4/U6 small nuclear ribonucleoprotein PRP3
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111447152
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cmos03041]
    111447152
Spliceosome [BR:cmos03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    111447152
SSDB
Motif
Pfam: PRP3 Prp3_C
Other DBs
NCBI-GeneID: 111447152
NCBI-ProteinID: XP_022941939
UniProt: A0A6J1FPW9
LinkDB
Position
Unknown
AA seq 915 aa
MDRVTEKERSSKRSREERDGDQKHRSRDAEEKHFSKDEKHRESDHSHRRRHHRSDRDSKL
ERSHESRDLKHRRDRSPDERESSQDRDFKRERSYDVRDERERSRDRVSSKRERSSEPRGE
REGSKERGKLREVRREQSDDEYEREDSLGPIQNSARSSNKRKERGGSEDRFDGGEKRARA
SEDGKDLRRNEDGKEVNGAEMDDRKERRRFADGEKDDEANMSGRGKRERKRFGDRAKEED
NGGNVDGKVQVGGTSDEKRSTGNGSTVEHIDMSSSVPQNLLHPGHSHPIKVSSISTTNEN
KGVSIARSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK
DGWSSSASSSAVKSEEKAKPAGGLLGLTATTNVTTTHSAGVASSSSTLPAANALGGGINV
PASLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNVATDVAVSQKPSKAPVLRL
DALGREIDEQGNVVNLTKPSDLSTLKVNINKQKKDAFQILKPELDVDPESNPHYDERMGI
NKTKLLRPKRMSFLFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINP
NLIEVSERVVKERTKEPIPEIEWWDVPLLHSGTYEHVGDGFVADDKIRKDKITIYVEHPR
PIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLM
KVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFEDTNSLET
IVSVYKINDLSHPQARFKVDVNARENRLSGCAVICDNISVLVVEGGSKSIKRYGKLMLKR
INWAASVKEEEEEDENDDKPVNKCSLVWQGSVAKSSFHKFSIQECMTEAAARKIFADAGV
GHYWDLAVNFSDDLI
NT seq 2748 nt   +upstreamnt  +downstreamnt
atggacagggttaccgagaaggagagatcaagcaagcgttctcgagaagaacgcgatggt
gaccagaagcatcgaagtcgagacgccgaggaaaaacatttctccaaggatgaaaagcac
cgtgagtccgatcactcccatcgtcggcgtcaccatcggtcggaccgtgattcaaagctt
gagcgttcgcatgagtctcgcgatctcaaacatcggcgtgataggtctcccgatgagcgt
gagagctcccaagatcgagattttaagcgggaaagatcttatgatgtcagggatgagaga
gagaggagtagagatagggtttcgtctaagcgagagcggtcgagtgagccgagaggggag
agagagggcagcaaggagaggggcaagctacgcgaggttaggcgcgagcagtcggacgat
gagtatgaacgggaagactcattggggccaatccagaattctgcacgttcttcaaacaag
aggaaggagaggggaggaagtgaggataggtttgatggtggtgagaagagggctagggct
tcagaagacgggaaggatcttagacgaaatgaagacgggaaggaagtgaatggagctgag
atggatgacagaaaggagcggaggagatttgctgacggtgagaaagatgatgaagcaaac
atgagtggtaggggaaagagggagaggaaacggtttggggatcgggcaaaggaagaggat
aatggtggaaatgttgatgggaaagttcaggttggaggcacctctgatgaaaaaaggtcc
acggggaatggatctacagtggaacatattgacatgtcatctagtgtgccccagaatttg
ttacatcctggtcattcccatcctatcaaggtatcttcaatttctaccacaaatgaaaat
aagggagttagtattgccagatctcatgaggttcatggaaaatctagtacagatgggaca
tcttcaaccgcggggaaaagtggaaatctctctctggatgctttagcaaaagctaagaaa
gctttacagatgcagaaagaattggccgagaagttgaagaaaattcccttgatgaagaag
gatgggtggtcaagttctgcaagtagctcagctgtgaaatcggaggagaaagctaagcca
gcaggtggtttattggggctaacggcaactacaaatgtcaccactacccattctgctggg
gtagcatcaagttcgtcgaccttaccagctgccaatgcacttggtggtggtattaatgtt
ccagctagccttacctctataccccattttgaagctgtcaaacgtgcacaggagcttgct
gccaggatgggatttcgccaggatccagagtttgctcctcttataaatttgtttccgggg
aatgtagcaactgatgttgctgtttcacagaagccaagcaaggctcctgtgcttcgcctt
gatgcactcggcagggaaatagacgaacaaggaaatgttgtcaatttaaccaaacccagc
gacctcagcactctaaaggttaacatcaacaaacagaaaaaggatgcatttcaaattctt
aaacctgaacttgatgtggatcccgaatcaaatcctcattatgatgagaggatgggtata
aataaaactaaactgttaaggccaaagaggatgagtttcctgttcgttgaggaggggaaa
tggtccaaggaggctgaaaccataaaattaaggagtaaatttggagaggcacaagctaaa
gaacgaagggagaagcaggcacaattggccaaggccaaggctgcacctgatataaatcca
aatctgatcgaggtatcggagagagttgtgaaagaaagaacaaaagaaccaattcctgaa
atcgagtggtgggatgtccctcttttgcattctggcacatatgagcatgtgggagatggt
tttgtggctgatgataaaataaggaaggataagattaccatatatgtggagcatcctcgt
cctattgagcctcctgctgaaccagctcctcctcctcctcaaccactaaagctaacaaag
aaggagcagaaaaaactccgtacgcagcgtcgtctggcgaaggagaaagatagacaggag
atgattagacaaggcctgatagaaccaccgaaaccaaaagttaaaatgagcaatttaatg
aaagttcttggctcagaagcaacccaagaccctacaaaacttgagaaagagattcgtgct
gcagctgctgagagggaacaagctcacatagatcgaaatattgcacgaaaactgacccca
gcagaacgccgtgaaaagaaagaacgcaagctttttgaggatacaaattcactggagaca
attgtatccgtttacaagatcaacgatttatcacacccacaggcccggtttaaagttgat
gttaatgctagagagaaccgattgagtggatgtgctgtgatatgtgacaacatcagcgtt
ttggtcgttgaagggggcagcaaatccatcaagaggtatgggaagcttatgcttaagcgc
ataaattgggccgcttccgtgaaagaggaagaagaggaggatgaaaatgacgacaagccc
gttaataaatgttcattggtatggcaaggaagtgttgccaaatctagcttccataaattt
tctatccaggagtgcatgacggaggcagctgctaggaagatttttgctgatgctggtgtc
ggtcattattgggatctcgccgttaacttttccgatgatctaatataa

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