Cucurbita moschata (crookneck pumpkin): 111447152
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Entry
111447152 CDS
T05248
Name
(RefSeq) protein RDM16-like isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111447152
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmos03041
]
111447152
Spliceosome [BR:
cmos03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
111447152
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GFIT
Motif
Pfam:
PRP3
Prp3_C
Motif
Other DBs
NCBI-GeneID:
111447152
NCBI-ProteinID:
XP_022941939
UniProt:
A0A6J1FPW9
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Position
Unknown
AA seq
915 aa
AA seq
DB search
MDRVTEKERSSKRSREERDGDQKHRSRDAEEKHFSKDEKHRESDHSHRRRHHRSDRDSKL
ERSHESRDLKHRRDRSPDERESSQDRDFKRERSYDVRDERERSRDRVSSKRERSSEPRGE
REGSKERGKLREVRREQSDDEYEREDSLGPIQNSARSSNKRKERGGSEDRFDGGEKRARA
SEDGKDLRRNEDGKEVNGAEMDDRKERRRFADGEKDDEANMSGRGKRERKRFGDRAKEED
NGGNVDGKVQVGGTSDEKRSTGNGSTVEHIDMSSSVPQNLLHPGHSHPIKVSSISTTNEN
KGVSIARSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK
DGWSSSASSSAVKSEEKAKPAGGLLGLTATTNVTTTHSAGVASSSSTLPAANALGGGINV
PASLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNVATDVAVSQKPSKAPVLRL
DALGREIDEQGNVVNLTKPSDLSTLKVNINKQKKDAFQILKPELDVDPESNPHYDERMGI
NKTKLLRPKRMSFLFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINP
NLIEVSERVVKERTKEPIPEIEWWDVPLLHSGTYEHVGDGFVADDKIRKDKITIYVEHPR
PIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLM
KVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFEDTNSLET
IVSVYKINDLSHPQARFKVDVNARENRLSGCAVICDNISVLVVEGGSKSIKRYGKLMLKR
INWAASVKEEEEEDENDDKPVNKCSLVWQGSVAKSSFHKFSIQECMTEAAARKIFADAGV
GHYWDLAVNFSDDLI
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atggacagggttaccgagaaggagagatcaagcaagcgttctcgagaagaacgcgatggt
gaccagaagcatcgaagtcgagacgccgaggaaaaacatttctccaaggatgaaaagcac
cgtgagtccgatcactcccatcgtcggcgtcaccatcggtcggaccgtgattcaaagctt
gagcgttcgcatgagtctcgcgatctcaaacatcggcgtgataggtctcccgatgagcgt
gagagctcccaagatcgagattttaagcgggaaagatcttatgatgtcagggatgagaga
gagaggagtagagatagggtttcgtctaagcgagagcggtcgagtgagccgagaggggag
agagagggcagcaaggagaggggcaagctacgcgaggttaggcgcgagcagtcggacgat
gagtatgaacgggaagactcattggggccaatccagaattctgcacgttcttcaaacaag
aggaaggagaggggaggaagtgaggataggtttgatggtggtgagaagagggctagggct
tcagaagacgggaaggatcttagacgaaatgaagacgggaaggaagtgaatggagctgag
atggatgacagaaaggagcggaggagatttgctgacggtgagaaagatgatgaagcaaac
atgagtggtaggggaaagagggagaggaaacggtttggggatcgggcaaaggaagaggat
aatggtggaaatgttgatgggaaagttcaggttggaggcacctctgatgaaaaaaggtcc
acggggaatggatctacagtggaacatattgacatgtcatctagtgtgccccagaatttg
ttacatcctggtcattcccatcctatcaaggtatcttcaatttctaccacaaatgaaaat
aagggagttagtattgccagatctcatgaggttcatggaaaatctagtacagatgggaca
tcttcaaccgcggggaaaagtggaaatctctctctggatgctttagcaaaagctaagaaa
gctttacagatgcagaaagaattggccgagaagttgaagaaaattcccttgatgaagaag
gatgggtggtcaagttctgcaagtagctcagctgtgaaatcggaggagaaagctaagcca
gcaggtggtttattggggctaacggcaactacaaatgtcaccactacccattctgctggg
gtagcatcaagttcgtcgaccttaccagctgccaatgcacttggtggtggtattaatgtt
ccagctagccttacctctataccccattttgaagctgtcaaacgtgcacaggagcttgct
gccaggatgggatttcgccaggatccagagtttgctcctcttataaatttgtttccgggg
aatgtagcaactgatgttgctgtttcacagaagccaagcaaggctcctgtgcttcgcctt
gatgcactcggcagggaaatagacgaacaaggaaatgttgtcaatttaaccaaacccagc
gacctcagcactctaaaggttaacatcaacaaacagaaaaaggatgcatttcaaattctt
aaacctgaacttgatgtggatcccgaatcaaatcctcattatgatgagaggatgggtata
aataaaactaaactgttaaggccaaagaggatgagtttcctgttcgttgaggaggggaaa
tggtccaaggaggctgaaaccataaaattaaggagtaaatttggagaggcacaagctaaa
gaacgaagggagaagcaggcacaattggccaaggccaaggctgcacctgatataaatcca
aatctgatcgaggtatcggagagagttgtgaaagaaagaacaaaagaaccaattcctgaa
atcgagtggtgggatgtccctcttttgcattctggcacatatgagcatgtgggagatggt
tttgtggctgatgataaaataaggaaggataagattaccatatatgtggagcatcctcgt
cctattgagcctcctgctgaaccagctcctcctcctcctcaaccactaaagctaacaaag
aaggagcagaaaaaactccgtacgcagcgtcgtctggcgaaggagaaagatagacaggag
atgattagacaaggcctgatagaaccaccgaaaccaaaagttaaaatgagcaatttaatg
aaagttcttggctcagaagcaacccaagaccctacaaaacttgagaaagagattcgtgct
gcagctgctgagagggaacaagctcacatagatcgaaatattgcacgaaaactgacccca
gcagaacgccgtgaaaagaaagaacgcaagctttttgaggatacaaattcactggagaca
attgtatccgtttacaagatcaacgatttatcacacccacaggcccggtttaaagttgat
gttaatgctagagagaaccgattgagtggatgtgctgtgatatgtgacaacatcagcgtt
ttggtcgttgaagggggcagcaaatccatcaagaggtatgggaagcttatgcttaagcgc
ataaattgggccgcttccgtgaaagaggaagaagaggaggatgaaaatgacgacaagccc
gttaataaatgttcattggtatggcaaggaagtgttgccaaatctagcttccataaattt
tctatccaggagtgcatgacggaggcagctgctaggaagatttttgctgatgctggtgtc
ggtcattattgggatctcgccgttaacttttccgatgatctaatataa
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