Cucurbita moschata (crookneck pumpkin): 111447399
Help
Entry
111447399 CDS
T05248
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos04120
Ubiquitin mediated proteolysis
cmos04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111447399
04120 Ubiquitin mediated proteolysis
111447399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmos04121
]
111447399
Enzymes [BR:
cmos01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111447399
Ubiquitin system [BR:
cmos04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111447399
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-ANAPC11
zf-RING_11
zf-RING_16
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
111447399
NCBI-ProteinID:
XP_022942315
UniProt:
A0A6J1FNJ3
LinkDB
All DBs
Position
Unknown
AA seq
556 aa
AA seq
DB search
MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL
TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA
QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM
ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGLQSDANLQGTGTT
SSSAQGSGGTSAAGDSLGHHQARVQAAAAAASIYEKSYVYPFGNTLAWSPGYAVIPQVQR
PLLDSNNVEPIGEQAPNEQAQYFPFTGGPANLSFTQIPQNLFIPFQPREGTVNNTDGLGS
SQNISGSQLESQERFLQQQIEILQDQLQLLRKLKVEESSIAGEADKKGKSIASSSQSSSS
SVSDSHPHGETERTVG
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagctgcaaacatatgcgggaattagtttcattgcaactatagtggtgatatat
catgcctttaacagtagaggccagttctacccagcgttggtctatttatcaacttccaag
atcaatctagtgcttcttctcaacatgggtttagtcctcatgtgcattttgtggcagcta
accaaaaaaatatttcttggttctctccgagaagcagaggttgagaggctcaatgagcaa
tcgtggaaggaattgatggaaatcctctttgccatcactatctttcggcaagatttttct
gttgcattccttgctatggttacggctttgttgttgatcaaagctttgcattggttggct
cagaagagggttgaatacatggaaaccactccatcggtgccgttgttgtctcatatccgg
attgtttctttcttgggttttctctttgttctagatagtctgtttttgtataattcgata
ggttctctgatacagacaaggaaggcttcagtttccctcttcttttcatttgagtatatg
attcttgcgacaacagccgtgtcaacatttgtgaaatatattttctatgtcagtgatgtg
ctcatggagggacaatgggaaaaaaagcctgtctatacattctacttggagcttatccga
gacttgcttcacttgtcgatgtacttgtgtttctttcttgtgattttcatgacatatggc
gtgcctttgcacttgatccgtgagctctatgagatctttaggaattttaggattcgtatt
gcagattacattcggtatagaaagattacttcaaacatgaatgatcgttttccagatgca
acacctgaagaactcaattcaagtgatgcaacatgcattatttgtcgtgaagagatgaca
gttgcaaagaaactagtatgtggacatctttttcatgtccattgcctccggtcctggttg
gagcgacaacatacttgtcccacttgcagagcccttgttgtaccacctgaaggttcaagc
acagcaggaggtcatcagggattgcagtctgatgctaacctacaaggaacaggaaccaca
agttcgtctgcacaaggttcgggtggtacaagtgctgcgggtgatagtttgggtcatcat
caggctagagtccaggctgctgctgctgctgcttcaatatatgagaaatcttatgtttat
ccttttgggaacacattagcatggtctcctggatatgcagtaattcctcaggttcaaaga
cctttgcttgactccaacaatgtagaaccgattggagaacaagctcccaatgaacaagca
caatattttccatttacaggcggccctgcaaacctgtcctttactcaaatcccccaaaat
ctttttattccttttcagccacgagagggcactgtaaacaatacggatggattgggcagt
agtcaaaatatatcaggctcacagcttgaatctcaagaaagatttcttcaacaacagatt
gagatcctacaagatcagctgcaacttctccgtaaactgaaagtcgaggaaagctcaata
gcaggcgaggcagacaagaaagggaaaagcatagcatcatcgtcgcagtcatcatcttca
tcagtttctgattctcatccacacggagaaacggaaaggacggtgggataa
DBGET
integrated database retrieval system
