Cucurbita moschata (crookneck pumpkin): 111447626
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Entry
111447626 CDS
T05248
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
111447626
Enzymes [BR:
cmos01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
111447626
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
Endotoxin_C
Motif
Other DBs
NCBI-GeneID:
111447626
NCBI-ProteinID:
XP_022942656
UniProt:
A0A6J1FPG8
LinkDB
All DBs
Position
Unknown
AA seq
680 aa
AA seq
DB search
MKQWGLALWCTAMAAVFFFFFPLHHSTNRIPTTPLSRRNLMDMNINNSSGQFKVRLQRSG
GNVVMDNGIVQVTLSTPDGDVVGLSYNGIDNILDTKTEAPNRGYWDAVWNNPNEPINTDR
LLGTSFKVIVSTDEQLEISFVKTWSVAVGNKNAPVNVDKRFVLLRGSSGFYTYAVFERLT
GCPEIEMDQVRIVFRPQKKMFDYMAVSDSRQRVMPTMDDRNNGDPLQYPEAVLLTNPANE
KLRGEVDDKYMYSIEDKDNLLHGWISRNPPTGFWMITPSDEFRVAGPVKQDLTSHAGPIT
LSMFASTHYAGTDVGMKFAEGEPWKKVFGPVFVYLNSASPKEDYRSLWQDAKQQLATEIS
KWPYTFPQSEDFPSSAQRGSVAGRLLIRDGSISDRLLRASNAFVGLALPGPVGSWQRESK
GYQFWTQADSHGSFLINNVREGVYNLYAFVPGFIGDYKYEGNITIKAGSKIKLDEMVFDP
PRQGPTIWEIGIPDRTAAEFYVPDPFPTLMNKLYIDHDDKFRQYGLWERYAAMYPNNDLV
FTVGVDNYTQDWFYAHVTRDVGNQTYEATTWEVRFSLQSVNQTANYTLQIALASAADCEL
QVRLNDKTSSQPAFTTGRIGRDNAIARHGIHGLYWLYSVPFPGTQFLKGNNSMYFTQARS
HGPFQGLMYDYVRLEAPPRT
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaatggggtttggctctttggtgcacagccatggctgccgttttcttcttcttc
tttcctctccaccacagtaccaatcggattccgaccaccccactaagtaggagaaactta
atggacatgaacatcaacaattcttcggggcaattcaaagtcagactacaaagaagtggt
ggaaatgtcgtgatggataatggtattgtccaagttactctgtccaccccagatggtgac
gtggttggattgagctacaatggaatcgataacattctggacaccaaaaccgaagcgccg
aacagaggctactgggacgccgtatggaacaacccaaacgaacccattaacactgacaga
ttactaggaacctcgtttaaagtgatagtatccactgacgagcaactggaaatctcgttt
gtcaaaacatggagcgttgcagttgggaacaagaacgcccctgtaaatgtagacaaaaga
ttcgtgttgctgagaggaagttctgggttttatacgtatgccgtattcgagaggctgacg
gggtgcccggagattgaaatggatcaagttaggatcgttttcagacctcagaaaaaaatg
tttgattacatggctgtatcggacagtaggcagagagtgatgccgacaatggacgaccga
aataatggtgatccattgcaatatcctgaggctgttcttttgaccaatcctgccaatgag
aaactcagaggagaggtagatgacaagtacatgtactcaatagaggacaaggacaaccta
cttcacggctggatctccagaaatccaccgactggattctggatgatcactcctagtgac
gagttccgcgtcgccggtccggtcaagcaggatctgacctcccacgccggccccatcact
ctctccatgttcgctagcacccactacgctggaacggatgtgggcatgaaatttgcagaa
ggagagccttggaagaaggtcttcggccctgtatttgtctatctcaactctgcttcccct
aaggaggattaccgttctctatggcaagatgccaaacaacagttggcaacggaaatcagt
aagtggccctatacttttccccaatcagaagacttcccttcttctgcccaaagagggagc
gtcgccggccggttactaatccgtgatgggtctatcagcgacagacttttgcgtgcgagt
aatgctttcgttggattggcattgcctggtcctgtgggatcttggcaaagggaaagcaag
ggctatcaattctggactcaagctgacagtcacggcagcttcttaatcaataacgtccga
gaaggagtttataatctttatgcttttgttcctggctttattggagactacaagtacgag
ggaaatataacaatcaaggctgggtctaaaattaaattggatgagatggtgtttgatccg
ccgagacagggcccaaccatctgggagatcggcattcccgaccgcacagcagcggagttt
tatgtgcccgacccttttccgactctcatgaataaactatacattgaccatgatgacaag
ttcagacaatatgggttgtgggaacgttatgcggctatgtatccaaataatgatcttgtg
tttactgttggtgtggataattatacccaggactggttctatgcgcatgttaccagggat
gtggggaatcaaacatacgaagcaaccacatgggaggtcagattttcattgcaatctgtg
aaccaaacggcaaattacacattgcaaattgcattggcatctgctgctgattgcgagtta
caggttcggttaaacgataaaacgtcgagccaacccgcgtttacgacaggaaggatcgga
agggacaacgcaattgcaaggcatgggattcatgggctttactggttatactcggtgcct
ttccctggcactcagtttctgaaagggaacaactccatgtatttcactcaggcaagaagc
cacggccctttccaaggtctcatgtacgactacgttcgactcgaagctccacctcgaaca
taa
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