KEGG   Cucurbita moschata (crookneck pumpkin): 111447731
Entry
111447731         CDS       T05248                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
  KO
K12625  U6 snRNA-associated Sm-like protein LSm6
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03018  RNA degradation
cmos03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111447731
  09123 Folding, sorting and degradation
   03018 RNA degradation
    111447731
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmos03019]
    111447731
   03041 Spliceosome [BR:cmos03041]
    111447731
Messenger RNA biogenesis [BR:cmos03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     111447731
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     111447731
Spliceosome [BR:cmos03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    111447731
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 111447731
NCBI-ProteinID: XP_022942809
UniProt: A0A6J1FPX7
LinkDB
Position
Unknown
AA seq 92 aa
MSIGGEKGSVSTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN
GQLKNKYGDAFIRGNNVLYISTSKRTLAEGSS
NT seq 279 nt   +upstreamnt  +downstreamnt
atgagtattggtggtgaaaaaggttctgtgtcaacaaagacaccagcggactttctcaaa
tcaattcggggccgtcctgtagttgtgaaactcaattctggtgttgactaccgaggtatt
cttgcctgtctggatggatacatgaacatagcaatggagcagaccgaagaatacgtaaat
gggcagttgaaaaacaaatatggcgatgctttcatccgtggaaataacgttctgtacatc
agtacttcgaagaggacattagcagaagggtcttcttag

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