Cucurbita moschata (crookneck pumpkin): 111447786
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Entry
111447786 CDS
T05248
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 32
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmos03009
]
111447786
Enzymes [BR:
cmos01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111447786
Ribosome biogenesis [BR:
cmos03009
]
Eukaryotic type
90S particles
Helicases
111447786
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Helicase_C_2
PIN_12
Motif
Other DBs
NCBI-GeneID:
111447786
NCBI-ProteinID:
XP_022942894
UniProt:
A0A6J1FSN4
LinkDB
All DBs
Position
Unknown
AA seq
732 aa
AA seq
DB search
MKQKFKSKKSSGKQKRLSEIEEIKLLNSWIQSQKPDSGSNPMSLPPPPAGAPLGRIDADT
YSCYAGATKFDQLPISNKTKDGLRKAEFVDMTDIQRASLPHALCGRDILGAAKTGSGKTL
AFLIPVLEKLYRERWGPEDGVGSIIISPTRELGAQLFDVLKAVGKFHNFSAGLLIGGRKD
VNTEKEHVNELNILVCTPGRLLQHMDETPNFDCSQLQVLVLDEADRILDVGFKKTLNAII
SQLPKHRQTFLFSATQTKSVQDLARLSLKDPEYLSVHEESVTATPNSLQQTALVVPLEQK
LDMLWSFIKAHLNSKILVFLSSCKQVKFVFETFKKLRPGIPLKCLHGRMKQDKRMGIYSE
FCEKRSVLFSTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYHSGGRSVLFLM
PSEMKMLEQLESAKVPIQLIKANTKRLQPVSGLLSALLVKYPNFQQLAQRAFITYLRSIH
IQKDKEIFDVMKLSIDDFSASMGLPMTPKIRFIDQKKRSQKMSANTTTYLALESSDNENA
LNPSGEELEYGDFKESNQGLLPPTDIPTSEVEDAVPRTRILKKKKLKINVHRPLGTRVSF
DDEGNPLAPLAKLADIKSSNETFVVDKDLKNEFYKKRREELKQADKEDKLLNHNRLKEKR
KEKMNKMKKRAAKEIEDDDDVSASEEDRPQKRSKKFVDSDSDIDNKADLNTESISVAEQE
ELALKLLSTLRP
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagaaattcaaatccaagaagtcgtctggcaagcagaagcgtctatccgaaatt
gaagaaattaagctcttgaattcatggattcaatcccagaaacccgactcaggctctaac
ccgatgtcgcttcctccacctcctgcgggtgctccccttggccgcatcgacgccgatact
tactcttgttacgccggagctactaagtttgatcagttgccgatttcgaacaagaccaag
gatgggttgcggaaagctgaattcgttgatatgacggacatacagagggcttcgctgcct
cacgccctttgtggtcgagatattcttggtgcagccaaaactggttcaggaaagacgcta
gcttttctcatacctgttcttgagaagttgtatagagagagatggggtcctgaggatgga
gtagggagtataataatatctcccacaagagaattaggagctcagctttttgatgtttta
aaagctgttgggaaatttcataatttcagtgctggccttttaattggtggtcgtaaagat
gttaacactgagaaggagcatgtgaatgagttgaacattcttgtttgcactcccggtcga
ctccttcagcacatggacgagactccaaattttgattgttcacagttgcaggttttagtc
cttgatgaagctgatcgtattcttgatgtcggatttaagaagactttaaatgcaattatt
tcacagctacctaagcacagacaaacctttctgttctcagcaactcaaacaaagtctgtt
caggatcttgccagactcagtttgaaagatcctgagtaccttagtgttcatgaagaatct
gtgacagctacccccaatagtttacaacaaactgctttggttgttcctctcgagcaaaag
ctagacatgttatggagctttataaaggcacatcttaattctaagattcttgtgtttctc
tcaagctgcaagcaggtgaagtttgtttttgaaactttcaaaaagctgcgtcctggaatc
ccattgaagtgcctccatggaaggatgaagcaggacaaaaggatggggatatattctgag
ttctgtgagaagcggtcagtcctcttctcaacagatgtagcctctagaggtctggatttt
aataaggctgttgactgggttgtacaggttgattgcccagaagatgtggcttcttacata
catagagttggccgcaccgctcggtaccattcaggtgggagatctgttttatttcttatg
ccctcggagatgaaaatgcttgaacaattagaatctgctaaagtacctattcagcttatc
aaggcaaatacaaaaagacttcaaccagtttctggtttgctgtcagctttgttagtcaag
tatcccaattttcagcaactcgctcaaagggcctttatcacatatcttcgatcaattcat
atccagaaggataaggaaatctttgatgttatgaaactatcaattgacgatttttcagct
tcaatggggctgccaatgaccccaaaaatccgtttcattgatcagaaaaagaggtcacag
aagatgtcggctaacactaccacctatcttgcgttggaatcgtctgataatgagaatgct
ttaaatccatccggtgaagaattggagtatggcgactttaaagaaagcaaccaaggactt
cttcctcctactgatatccctactagtgaagttgaagatgctgtgccacgtactcggatt
ttgaagaaaaagaagttgaagatcaatgtccacagaccattagggacgagagtcagtttt
gatgacgagggcaacccacttgcccctcttgctaagctagctgacatcaaaagtagcaat
gagacatttgtagtcgacaaagatctaaaaaatgagttttacaaaaagaggagggaagag
ttgaaacaagctgacaaggaagacaaacttctcaatcataatcgcctaaaggagaagcgg
aaagagaagatgaataagatgaagaagagggctgccaaagaaattgaggacgacgacgac
gtttctgcgtctgaagaagacagacctcagaaaaggtccaagaaatttgtcgacagtgat
agcgacattgacaataaagcggacttaaatacagagtcgatttcagtggcagaacaagag
gagttggctctcaaattactaagtactctgcgcccatga
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