Cucurbita moschata (crookneck pumpkin): 111447932
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Entry
111447932 CDS
T05248
Name
(RefSeq) uncharacterized protein At3g06530
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
111447932
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmos03009
]
111447932
Ribosome biogenesis [BR:
cmos03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
111447932
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARM_At3g06530
HEAT_HEATR1
BP28CT
U3snoRNP10
HEAT_EF3_N
NopRA1
HEAT_2
Tti2
Motif
Other DBs
NCBI-GeneID:
111447932
NCBI-ProteinID:
XP_022943098
UniProt:
A0A6J1FWC5
LinkDB
All DBs
Position
Unknown
AA seq
2153 aa
AA seq
DB search
MASSIASQLQAIKSFVQADSEPLKRPFTRPSILFDPKEAADIDVDTVFGIALQGLEVLIS
MDERFRNYKNNLFSYKSREQDRELMGEEENKRINATISSYLRLISGHFQQPSSLKTLEYL
IRRYKIHVHNVEDLVLCALPFHDTHAFVRLAQLLVLGNSKWKFLEGVKLSGAPPPRKVIV
QQCVRDRGVLEVLCNYAIPSKNFHPARPVVNFCTAVVIEVLGTLTSIEPNVLNIVLLFIR
TGLQPGTKGISDQKAGALMIVGLLANKAILVPKLAKSLIRSISEIANEDARESSDMQSVR
LSLMALITLAQSQSVDVFPRKVLDILMGIRDLAGILLELSRAFNIDKFLSILMDSLVEYS
FSSDLCQRGLISLIETIPMMHLMHNIITKVLVSCSKFSEKSNTPSSSNPGSWAKKFIIVV
NKVYPSEFHSAVQKFFEDAKLQHKIGGSVYEIVCNTLDGSCDMSLPISDSKLLFALHHPK
AEVRRAALSTLSTAGNLKAKTDHLESLVTVQDAILKLLRDDDLTVVQKAITLDGISDILS
SSVLLKALKDVLFRCIGVLKSGLSANSNLAADIAFECLNSLKEYLYDHVDDLQMFFSLTF
PLLLVLPKTKRLNLKALELAKEIKWHFYQNLAGVNTDMVSQRGNISSMNMDVVNNLAKSF
LLHPEEYTPWLIESCKACDSSRVLFLLVVLQSTVMQKDSNTQFWSFFEVLFPVLKIEWDV
YESTYGASIDKFKTEMLDWDCKRFLDQLVKEDHNELNAVALICIFWRLLDAYISSVNADM
VLEKKEKWISMFSDLFVLFATSRFKHVFKEHLHYLVRSFKISPVHLLSRFFTDEGVPASV
QVESLHCLSYLCSQSEEGLRVQLFAEFPSILVPLASDDKDTRIVAMNCIEGLLSLLDHAN
FSCKKNGSNAIWNHFLDKLLGLMVEQKRLILSDINFLPSFLASLLGSSSDTLIVPQRIDQ
RFDKATKEMILAFILGYALQLSDYGKLRILSLFKSMGNAILHVKEVEALLSLLLERRNRY
HLELDRSIHNLSSIEVSILCLLLECCATPSSFDWHISEGYLLKALQLNGGSPSEDAIVRP
SLAILQKLDDRIYSMMENEMQELLFSKLVLLSQDADNNVQTATREALMRLHITTSTISQM
LSYVLKCEGFVGSLVDRKKKKKSLEYHASNSPYDMICKKENTFSFLSSVLDILLLKKDMA
NRQSLIGQLFMLLGKVFSKDWGNAALALDEQSNHAVSSVSQGISDAIGYIRQTILIVLED
ICSSVATTTPQEIQWRKDIDIKLLIDCTHLSKDGVTRNHVYSLISSVAKSIPEKVVEHML
DILTLIGESAVRQVDSHSERVLEDLIAAVVPCWLSKTENMDKLLETFISILPEIAEDRML
KIFHYLLRIVGEWKGLASLLLHLFKSLVSKLPSSEDLHGLDGFMSFVHREQEYVFALHIC
EKYSCSTWLRALATMFKHMGLDDFCVESLKQLFLATNFCLDKLQGPEFAFRLASQENSDD
IQSILGELLEQVVYQVQLVDTRSQEIGIPVAIRKEIRENMHAILRSITRVMSPSAFFRST
MNLLGHNNRNVGKKALSLLCETVKEHSGIKSKKRTKKEKISGSPWLHMDDSFLKLFDSIS
SRIVHLIDDSTNASDSSLKVAAVSAIEILASAFPSYHSTISVWLASIGKYITSNNLTLSS
SCLRTCSTLINVLGPRSLSELPNIMGKVINVSRSCVVENTRGSSEISIQSSDLRDSVMLS
VAITLEAVVEKLGGFLNPYLGDMLELLVLHPNLVWGADSKLKLKADFVRNLLTEKIPVRL
VLPPLLKFFTRAVESGDSSLIITFNLLANIVGKMDRSSVTAYHTQIFDLCLCALDLRRQH
PVSVTSIDTVENSVMSALSLLTLKLTESMFKPLFIRSVEWADSDLEDAAGAGSKSVDRAI
SFYGLVNKLAEKHRSLFVPYFKYLLDGCVRHLTNSGDAKYTGSIPKRKKAKVHVSGDSKE
ETVVISLKSWHIRALVLSSLHKCFLYDTGSLKFLDSSNFQVLLKPIVSQMASEPPEMLDE
NINVPSVNKVDDVLVNCIGQMAVATGSDSLWKHLNHEVLMQTRSDKVRTRILGLRIVKYL
VENLKEEYLVLLPETIPFLGELLEDVELSVKSLAQDILKEMESMSGESLRQYL
NT seq
6462 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatccatcgcttcgcagttgcaagctatcaaatcctttgtccaggccgactca
gagccgctcaaaaggcctttcactcgaccttcgattctttttgaccccaaagaagcagct
gacattgatgtcgatactgtattcggcattgccttacaagggctggaggttcttattagc
atggatgaacgtttcagaaattataagaacaatttatttagctataaaagtagagagcag
gatagagagttgatgggtgaagaggaaaacaaacgtattaacgctacaattagttcgtac
ctgagactgatttcggggcactttcaacaaccttcctcacttaagactttagagtacttg
attcgcagatacaagattcacgtgcataatgtcgaggacttagttctttgtgccttgcca
ttccatgacactcatgcttttgttcgattagcgcagctgcttgttttggggaatagtaaa
tggaaatttctggaaggtgtgaaattgtcgggtgccccaccaccaaggaaggttatagtg
caacaatgtgtccgtgatcgtggtgttttggaagttttatgcaattatgctattccatct
aagaacttccatccagcgaggccagttgtcaatttctgcactgcagttgttatagaagtt
ttgggtactcttacaagcattgagcccaatgtgttgaacattgttcttttgtttattaga
actgggcttcagcctggcaccaagggaatttctgaccagaaggctggtgctttgatgatt
gttggtttgctagccaacaaagccatattggtacctaagcttgctaagagtttgattcga
tccatctctgagattgccaatgaggatgcgagggagtcaagtgatatgcaatcagttcgg
ctctcacttatggctttaatcacccttgctcagtcccaatcagttgacgtgtttccaaga
aaggtattggatatcttgatggggattagggatttagctggcattcttttggaactatcc
agagctttcaacatcgataaattcctctccatccttatggattccttagttgaatatagt
ttctctagtgacttgtgtcaacgtggtttgatctcactaattgagactattccgatgatg
catttaatgcataatatcattaccaaggttttagtgagctgctctaaattttccgagaag
agtaacaccccaagctcttctaatccaggttcttgggcgaagaagtttataattgttgtc
aataaagtttatccttcagaatttcattccgctgttcagaagttctttgaggatgcaaaa
ttgcaacataagattgggggctctgtatatgagattgtgtgtaatactttagatgggagt
tgtgatatgtcactgcctatttcagattcaaaacttttgtttgctttgcatcatcctaag
gctgaggttcgtcgtgctgctctttcgactttgagcacggctggaaatttgaaagctaaa
actgatcatttagagagtttagtgactgttcaagatgccatcttgaaactacttcgggat
gatgaccttactgttgttcagaaagctatcactcttgatggaatctctgacatattgagt
tcatctgttcttctcaaagcattaaaggacgtgctttttagatgcattggcgttttgaag
tctggtctgtcagctaatagtaatcttgctgctgacatagcttttgaatgcttaaacagc
ctgaaagagtatctctacgatcatgttgatgatctgcagatgtttttttcacttacgttt
cctttactcctagttttacccaagactaagagattgaatttgaaggctttggaattggcc
aaggaaataaagtggcatttttaccagaatcttgctggtgtcaacaccgatatggtctcg
cagcgtggcaacattagctcaatgaatatggatgttgttaataatttggcaaagtcgttc
ttgttacatccagaggaatatactccttggctgattgagagttgcaaagcttgtgattct
tccagagtactctttctccttgtcgtgctgcagtcaactgtcatgcaaaaagacagtaac
acccaattttggagcttctttgaagttcttttccctgttttgaagattgaatgggacgtg
tatgagtctacttatggtgcttctattgataagttcaaaactgaaatgttagattgggac
tgcaaaagattcctggatcagttagttaaagaggatcacaatgaattgaatgctgttgct
cttatttgcatattttggagactgttagatgcatatatatcgtctgtgaatgcagatatg
gttctggagaagaaggaaaaatggatttccatgttcagtgatttgtttgtgttgtttgca
acctcacgatttaagcatgtcttcaaggaacatctccattaccttgtcagaagcttcaag
atatctcctgttcatttgctgtctcgttttttcactgacgaaggtgttcctgcttcagtg
caagttgagagtctccactgtctttcttatctttgttctcagtcagaagaaggtttgcgc
gttcaactcttcgctgaatttccttcaatacttgtcccactagccagtgatgacaaggat
accaggattgtggccatgaactgcattgaagggctactttcattactggatcatgcgaac
ttttcttgcaagaaaaatggaagcaacgcaatatggaatcactttctagataaacttctg
ggtctgatggttgagcaaaaaagactcatattatctgacataaactttctcccttccttt
ctagcatctttgcttggttcatcctcagacaccttaatagttcctcagagaattgatcag
aggtttgataaagctacaaaagaaatgattctggctttcattttgggttatgctttacag
ctttctgattatgggaagctgagaatcctttctctgttcaaatcgatgggaaatgctatt
ctgcacgttaaggaagttgaggctctgttatctcttcttttggagagacgcaatagatat
catcttgaacttgacaggtccattcataacttgtcatcaattgaagtttccatcttatgt
cttctgcttgagtgttgtgctacaccatcttcttttgattggcacatttctgaaggttat
ttgttgaaggcattgcaattaaatggtggcagtccaagtgaagatgcaattgtacgtcct
tctttagctatcttgcaaaagctggatgatcgaatatatagcatgatggagaatgaaatg
caggaattgctgttttcaaaacttgttttgttatctcaagatgctgacaataatgttcaa
actgccacccgagaagccttgatgcgtctacatattactacctccaccatcagccagatg
ctgagttacgtgttgaaatgtgaaggttttgttggcagtttggtggataggaagaagaaa
aagaaatccctcgagtatcatgcatccaactcgccctatgatatgatttgtaaaaaagag
aacacattctcttttttaagctctgttcttgatattttgctactgaagaaggacatggct
aacaggcaatcccttataggccaattatttatgctgcttggaaaagttttttctaaggat
tggggcaatgctgctcttgcacttgatgagcagtcaaaccatgcagtatctagcgtttct
cagggcatatctgatgcaataggctacataaggcagacaatcttaatagttcttgaagat
atctgttcatcagttgcgactactactccacaagagattcagtggagaaaagacattgat
atcaaattgttgattgattgtactcatttatcaaaggatggagttacccgtaaccatgtg
tattcgttaatttcctctgtggcaaaatctatcccagaaaaagttgtggagcatatgctg
gatattcttactctcattggtgaatctgctgtcagacaggttgatagccattcagagcgt
gtacttgaggatctcattgctgctgttgttccatgttggctgtcaaaaactgagaacatg
gataaattgctcgagactttcattagcatactgcctgagattgctgaagatagaatgtta
aaaatattccattacttgttaaggattgttggggaatggaagggcttggcttcgttgctt
ttgcatctctttaagtcactggtttcgaagttaccttcctctgaagatttgcatggtctg
gatggtttcatgtcttttgtacacagagaacaggagtatgtgtttgcattgcatatttgt
gaaaagtattcatgctcgacttggcttcgtgctcttgctacaatgtttaaacacatgggt
ctggacgacttttgtgtggaatcactaaagcagttgtttctggcaacaaacttttgtcta
gacaaattgcaaggtccagaatttgctttcagattagcatcacaagaaaactcggatgac
atacagagcattcttggagaactactggagcaggttgtttatcaagttcaacttgttgat
acaagaagccaggaaattggtattccggtggctatcaggaaggaaataagagagaatatg
cacgctattttgaggagtatcactagggttatgagtccttcagccttcttcagaagtacc
atgaatttgcttggccataataatagaaatgttgggaaaaaggctctcagtcttctatgt
gaaacagttaaagaacacagcgggataaagtcaaagaagaggaccaagaaagagaaaatt
tctggaagtccctggcttcacatggatgatagctttctcaaattatttgacagtatatct
tcgagaattgttcacttaattgatgattctactaatgcttctgatagttctcttaaagta
gccgcagtttcagctatagaaattctggccagtgcatttccttcttaccattcaactatc
agtgtttggctagcgtcaattggaaaatatattacttcaaacaacttaactctctcttct
agctgccttcgaacatgcagcacactgattaatgtactggggccaagatcattgagtgag
ctgcccaatataatgggaaaggtaataaatgtgtctcgaagttgtgtcgttgagaataca
agaggcagttctgaaatatcaattcaatcatcagacttgagggattctgttatgctttct
gttgctataactttggaggctgttgtagagaaactcggtggatttctaaatccttatctt
ggagatatgttagaacttttagtgcttcatcctaacttagtatggggagcagattcaaag
ctgaagttgaaagctgactttgtacggaaccttctgacagagaaaattcctgttcgtctt
gtgttgccacctttgttgaaattttttactcgtgctgttgaatctggagattcaagcttg
atcatcaccttcaacttgctagcaaatattgttggaaaaatggataggtcttcagttact
gcttaccacacacagatttttgacctgtgcttgtgtgcccttgatttacgccgccagcac
cctgtttctgtcacaagcattgacaccgtagaaaatagtgtcatgagtgcattgagttta
ctgacacttaagcttactgaaagcatgtttaaacctttattcataagaagtgttgagtgg
gcagattcagatttagaagatgctgcaggtgctggaagcaaaagtgttgacagggccata
tctttctatggcctagtaaacaaacttgctgaaaaacataggtcacttttcgttccctac
ttcaagtacttgctagatggatgtgtccgtcaccttacaaattctggagatgcaaagtat
actggttcaataccgaaaaggaagaaagctaaggtgcacgtgagcggcgatagtaaagag
gaaactgtagtgatctctcttaaaagctggcatataagagcattggtcttgtcatcattg
cataagtgctttctctacgacactgggagcttgaaattccttgactcctcaaatttccag
gttctactcaagcccatagtttcacagatggcatctgagccaccagaaatgcttgacgag
aacattaatgttccgtctgtaaacaaggttgatgacgttctggtgaactgcattggtcaa
atggccgtggctactgggagcgattcgttgtggaaacacttgaaccacgaggtattgatg
caaaccagaagtgacaaggttcgtactcgaattctgggtctaagaatcgtcaaatatctc
gttgagaatttgaaagaagaatatttagtacttctacctgagaccatccccttcctcggc
gagctgcttgaagatgtggagctctctgttaaatctcttgcacaagatattctcaaggaa
atggagtctatgagtggtgaaagtcttcggcagtacctataa
DBGET
integrated database retrieval system
