Cucurbita moschata (crookneck pumpkin): 111448162
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Entry
111448162 CDS
T05248
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111448162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmos03019
]
111448162
03110 Chaperones and folding catalysts [BR:
cmos03110
]
111448162
03029 Mitochondrial biogenesis [BR:
cmos03029
]
111448162
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmos04147
]
111448162
Enzymes [BR:
cmos01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
111448162
Messenger RNA biogenesis [BR:
cmos03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
111448162
Chaperones and folding catalysts [BR:
cmos03110
]
Heat shock proteins
HSP60 / Chaperonin
111448162
Mitochondrial biogenesis [BR:
cmos03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
111448162
Exosome [BR:
cmos04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111448162
Exosomal proteins of other body fluids (saliva and urine)
111448162
Exosomal proteins of breast cancer cells
111448162
Exosomal proteins of colorectal cancer cells
111448162
Exosomal proteins of bladder cancer cells
111448162
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF1192
Motif
Other DBs
NCBI-GeneID:
111448162
NCBI-ProteinID:
XP_022943380
UniProt:
A0A6J1FXR2
LinkDB
All DBs
Position
Unknown
AA seq
583 aa
AA seq
DB search
MASANAISSASILCSSQKSLRKANQTQNNRLNYRQAGSRFVVRATAKEIAFDQSSRSALQ
SGIDKLANAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIREVA
SKTNDSAGDGTTTASVLAREIIKLGLLNVTSGANPVSLKRGIDKTVQGLIQELENKARAI
EGRDDIKAVASISAGNDELIGMMIADAIEKVGPDGVLSIESSSSFETTVEVEEGMAIDRG
YISPQFVTNPEKLIAEFENARVLVTDQKISAIKDIIPILEKTTQLRAPLLIIAEDVTGEA
LATLVVNKLRGILNVAAIKAPSFGERRKAMLQDIAILTGAEFQANDLGLLVENTTIEQLG
LARKVTISKDTTTIIADAASKDELQARIAQLKKELAETDSVYDTEKLAERIAKLSGGVAV
IKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTLVPAIKDKLEDAEE
KLGADIVQKALVAPASLIAQNAGIEGEVVVEKIKSSEWEIGYNAMTDKYENLVEAGVIDP
AKVTRCALQNAASVAGMVLTTQAIVVEKPKPKAPTAAPQGLTV
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgctaatgcaatttcttctgcatcgattctatgttcttcccagaagagtttg
agaaaggcgaatcaaacacagaacaacaggctaaattacagacaggcgggtagcagattt
gttgtgagagctactgctaaggagatagcgtttgaccaaagttctaggagcgcacttcag
tctgggattgacaagcttgccaatgcagtcggtctgactcttggacctagggggagaaat
gtggtgctggatgagttcggcagtcctaaagttgtaaacgatggtgtgacaattgctcgg
gcaattgagttgcctgatcccatggaaaatgctggtgcagctctaattagagaggttgca
agtaaaactaatgattctgctggtgatgggacgacaactgcctcagtcctcgctagggaa
attatcaagctaggcctgcttaatgttacctccggagcaaatccagtatcactgaagaga
ggaattgacaagaccgtgcaaggattgatccaagagcttgagaacaaggctagggctata
gaaggcagagatgatataaaagctgttgcttctatttctgctggaaatgacgagcttata
gggatgatgatcgctgatgccattgaaaaagtggggcctgatggtgtcttatccattgag
tcatcatcttcctttgagaccactgttgaagttgaagaagggatggcgattgacagaggc
tatatttctcctcagtttgttacaaaccctgaaaagttaattgctgaatttgagaatgca
cgagtgttagttacagaccagaaaatttcggccataaaggatataatccctatattggag
aaaaccacgcaattgagagctcctttgcttatcattgcagaggatgttactggtgaggct
ttggctacccttgttgtgaacaagttgcgggggattctaaatgttgctgccattaaagct
ccgagctttggagaaaggagaaaggcgatgcttcaagacattgccattttgacaggtgct
gagtttcaagccaatgatcttggattgctagtagaaaatactacaattgaacagcttggt
ttggcccgaaaagtgaccatctccaaggacactaccaccatcattgctgacgctgcttca
aaagacgagctacaagccaggattgcacagctaaagaaggaattggcggagacagattct
gtgtatgacacagagaaactcgctgaaagaattgccaaactatctggtggtgttgctgtc
attaaagtaggagctgcaacagagactgaacttgaggaccggaagctccgtattgaagat
gcaaagaatgcaactttcgctgccatagaggaaggcattgtacctggtggtggtgctgca
ctggttcacctctcaactcttgtccctgcaatcaaggacaagctcgaagatgccgaagag
aagctcggtgccgatattgtccaaaaggcgctggtagcaccggcatccttaattgcccaa
aatgctggaattgaaggggaagtagtggtggagaagataaagtcgagtgaatgggaaatt
ggttacaacgcaatgacagacaagtacgagaatctagtagaggccggcgttattgaccca
gccaaggtgaccagatgtgccttgcagaatgcagcttcagttgctgggatggtcctaacc
acacaggctattgtagttgaaaagcccaagcccaaggcacccaccgctgcaccacaaggc
cttactgtttaa
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