Cucurbita moschata (crookneck pumpkin): 111448208
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Entry
111448208 CDS
T05248
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111448208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmos04121
]
111448208
Enzymes [BR:
cmos01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
111448208
Ubiquitin system [BR:
cmos04121
]
Ubiquitin ligases (E3)
HECT type E3
111448208
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
ARM_ARMC5
Arm
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
111448208
NCBI-ProteinID:
XP_022943442
UniProt:
A0A6J1FT18
LinkDB
All DBs
Position
Unknown
AA seq
1890 aa
AA seq
DB search
METRSRKRAEASSAAPSSSSSGPTTRSSKRARLSGTFSSNLAASTLSISTRSRSTRNQEP
SATSTPMDSTNESSGSRRRGKNSDKENSDKGKEKEHEVRIGDRERNAEQSFGLNIEGSGG
GDDDDNDSEGGMGVLQQNLSTASSALQGLLRKLGAGLDDLLPSSAIASASSSQQRGRLKK
ILSGLRADGEEGRQVEALTQLCEMLSIGTEESLSTFSVDSFVPVLVGLLNHESNPDIMLL
AARALTHLCDFLPSSCAAVVHYGAVSCFCARLLTIEYMDLAEQSLQALKKISQEHPTACL
RAGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPSDAADFVMEAVPLLTNLLQYHDAKV
LEHASVCLTRIAEAFASSPDKLDELCNHGLVTQAASLISTSSTGGGQSTLSSATYTGLIR
LLSTCASGSALGGKTLLLLGISGILKDILSGSGVSTNSSVSPALNRPQEQIFEIVNLANE
LLPPLPQGTISFPPNYNLFVKGPVIKKPSTSGSVKEEDPTDSAPEMSAREKLLKDQPELL
HQFGMDLLPILIQIYGSSVNGPVRHKCLSGIGKLMYFSTPEMIQSLLNVTNIASFLAGVL
AWKDPHILIPSLQIAEILMEKLPETFSKMFLREGVVYAVDQLILANNQNTATQVASVEKD
NNSASGASSRTRRYRRRSGNMTSEGSSLDENKNPVSGGSVPQGSVEVPSINSNLRTSVSA
CANAFKTKYFPLDPGDVEVGVTDDLLRLKNLCAKLNAGIDVQKSKSKGKSKASGSCIDDI
ITNKDQYLTGVISEMLVELGKDDGVSTFEFIGSGVVGVLLDYFSCGYFSKGRILEAELPK
IRQQVLKRFKSFVSVALSTSINEGTVAPMTVLVQKLQSALSSLERFPVVLSHSSRSSSGS
ARLSSGLSVLSQPFKLRLCRAHGEKLLRDYSSNIVLIDPLASLAAVEEFLWPRVQRSEGQ
KLSVSGANSDSGTTPPGTVAPSGLKSTPSSTTCRYSTRSRSSMTIGERAGKELSQDKSTS
KGKGKAILKPAWEEKRGLQTRSSTRRRAAVDKDAQMKPVNGETTSEDEELDLSSIQIDDS
LVIEDDDISDDEDDDHDDVLQDDSLPLCMPEKVHDVKLGDTAEDGDAGPATSDSQIHSTF
GSSSRTATVRGSNSPDHRGGNSFSARGSMTFAAAAMAGLGPANGRGFRGGRDPQGHPLFG
GSNDNPKLLFSSGEKQLDRHLTIYQAVQRQLVLNEDDDERFAGAGNDFLSNDGSSLWGDI
YTITYQRADNQSERAALAGESSSSKSKSTKCVSTSNSNSESQFHQMSLLDSILQGKLPCD
LDKSNPTYDILSLLRVLEGLNQLAPRLRAQIVSDQFAEGKITTLDELGGIGGKVPHEEFV
NSKLTPKLTRQIQDALALCSGSLPSWCYQLTKACPFLFPFETRRQYFYSTAFGLSRALYR
LHQQLGADGLGTVNEREGRVGRLQRQKVRVSRNRILDSAVKVMEMYSNQKAVLEVEYFGE
VGTGLGPTLEFYTLLSHELQRAGLGMWRSNSLQESIDSGEDGQLRKPKDGSKLISDAGNI
DIIQSPLGLFPRPWPPNADSSDGSQFSKVIEYFRLVGRVMAKALQDGRLLDLPLSTAFYK
LVLGQDLDLYDILSFDPELGKTLQELQALVCRKQYLGLVDGDNQNTISNLSFRGIPVEDL
CLDFTVPGYPDYVLRPGDETVNIHNLEEYISLVLDATVKTGIMRQMEAFTTGFNQVFDIT
ALRIFIPHELDHLLCGRRELWKADTLVDHIKFDHGYTAKSPAIVNFLEIMGELTPEQQRG
FCQFVTGAPRLPPGGLAVLNPRLTIVRKHSSTATNAANSATGVSESADDDLPSVMTCANY
LKLPPYSTKEIMYKKLMYAINEGQGSFDLS
NT seq
5673 nt
NT seq
+upstream
nt +downstream
nt
atggaaactcggagcagaaagcgggcggaggcctcctcagctgccccttcttcttcgtct
tctggtcccactacccgttctagcaagcgcgctcgtctctctggtactttctcttcgaat
cttgctgcatccactctttcgatctcaacacgttctcgctctactcgaaaccaagaaccg
tctgccactagtactccaatggactcgaccaatgagtcatcagggtcacgccgacgcgga
aagaattctgataaggaaaactcggataaggggaaggagaaagaacacgaggttagaatc
ggggatagagaaagaaatgctgagcagagttttgggttaaatattgaaggcagtggcggt
ggggatgatgatgataacgacagtgaaggaggaatgggagtcttacagcaaaatttatcc
acagcaagcagcgcccttcaaggacttctgaggaaactcggtgctggactggatgattta
cttccatcttccgcaattgcatcggcttcatcctcacagcagagaggacggcttaagaag
atcttatctgggttgagagcggatggagaagaaggaaggcaggttgaggcattgacccaa
ctttgtgagatgctctctattggcaccgaggagtctctaagtactttctctgtggattcc
tttgtccctgtcctcgttgggctacttaatcacgaaagcaatcctgatataatgctttta
gcggccagggcactgacccatctgtgcgatttcttaccttcatcatgtgctgccgtcgtg
cattatggtgccgtttcctgcttctgtgctagattgctgactatagaatacatggaccta
gctgaacagtccctgcaagctttaaagaagatatcccaggaacaccctactgcctgtctg
cgggctggtgctcttatggctgtgctttcatatttagatttcttctccacaggagttcag
agagttgcgttgtcaactgctgctaatatgtgcaagaagcttccttcagatgcagccgac
ttcgtgatggaagctgttcccctgctgacgaaccttcttcagtatcatgatgcaaaagtg
ttggagcatgcttcagtttgtttgactcgtattgccgaggcctttgcatcatctcctgat
aaattagatgaactgtgtaaccatggacttgttactcaagctgcctcactcatttccacc
agtagtaccggaggtgggcagtcaactcttagctcagctacttacacaggattaatccga
cttctttccacatgtgcaagtggatctgccttaggtgggaaaactttgctgcttcttggg
atcagtgggattcttaaagatatattatctggttctggcgtgtctactaattcatctgtt
tcgcctgcattaaatagaccacaagagcagatttttgagattgtcaacttggcaaatgag
cttctaccccctctacctcaaggaactatttcctttccgcccaactataatttgtttgtg
aaaggacctgtcatcaaaaagccatctaccagcggttctgtgaaagaagaagatccaact
gatagtgccccggagatgtcagctcgtgagaaactcttaaaggatcagcctgagctcctc
caccagtttggaatggatctccttcctatcttaatacagatctatggatccagtgtgaat
ggtccggtacgtcataaatgtctctcaggaattggaaaattgatgtacttcagcacccca
gagatgatacagtcattattgaatgtgaccaatatagcaagttttctagctggtgttttg
gcatggaaagatccacacattttgattccttctctccaaattgctgagattcttatggaa
aagcttcctgaaactttttctaagatgttccttcgagagggtgttgtttatgctgttgac
cagcttatcttagctaataaccaaaatactgctacccaagtggcttctgttgagaaggac
aacaactctgcatctggagcttcttcacgcactcgacgttacaggcggcgcagtggaaat
atgacttcagaaggaagttcactggatgaaaacaaaaatcctgtttctggaggcagtgtt
ccacaaggttcggtggaggttccatcaattaactctaatctccgaacttcggtaagtgcc
tgtgccaatgcttttaaaacaaagtatttccctttagatccgggagatgttgaagttgga
gttacagatgatctcttacgtttgaagaatctttgcgccaagttgaatgctggtattgat
gttcagaaaagtaaatcgaaaggaaagtcgaaagcttcagggtcctgcatagatgatatt
attacaaataaggatcagtatttaactggcgtgatatctgaaatgctagttgaattaggc
aaagatgatggtgtttccacgtttgaatttattggtagtggcgttgttggagttctgctt
gactacttttcttgtggatacttttctaaaggaagaattttggaagcggagttgccaaag
attcggcagcaagtgcttaaaagatttaaatcatttgtttctgttgctctttccacaagc
attaatgaggggacagtagctcctatgacagtcttagttcaaaagctacagagtgcttta
tcctcattggagcgttttccagttgtcctgagccattcttctagatcatccagtggtagt
gcacgtctttcctctgggctaagtgtattatctcagccatttaagttacgactttgtcga
gcccatggagaaaaattacttcgtgattattcatcaaatattgttctgattgatccattg
gcaagtttagcagctgttgaagaatttctgtggcctagagttcagagaagtgagggtcag
aaactttcagtatctggtgcaaactcagattcaggaactactcctccaggaactgttgct
ccatcagggctaaaatcaacccccagttcaaccacttgccgttactctactaggtctaga
tcatcgatgactattggagaaagggcagggaaggagttgtcacaggataaaagcacatcg
aaggggaaggggaaagctattctaaagcctgcctgggaggagaagagaggcctacaaacc
agaagttctactcgtagaagagcagctgtggacaaggatgcccaaatgaagcctgtaaat
ggagagaccacttccgaggatgaagaattggacctatcctccatccagattgatgattct
ttagtgattgaggatgatgatatttctgatgatgaagatgatgaccacgatgatgtgctg
caggatgactctcttcctctttgtatgcctgaaaaggtgcatgatgtcaaattgggtgac
acagctgaagatggcgatgctggtccggctacaagtgatagccagattcattcaactttt
ggctctagcagtagaactgcgacagtcaggggttctaattctcctgatcataggggtgga
aattcttttagtgcaaggggaagtatgacatttgctgctgctgctatggctggacttgga
ccagctaacggcagaggtttccgtggaggtcgagatccacagggacatcctctctttggt
ggttccaatgataacccaaaattactcttttcttctggtgagaagcagcttgataggcat
ttgacaatataccaagctgttcaacggcagcttgttttgaatgaggatgatgatgagagg
tttgctggggctggcaatgatttcttatctaatgatgggagcagtttgtggggtgatata
tataccatcacgtatcagagggcagataatcaatctgaaagagctgctttagctggggaa
tcaagctcctctaaatctaaatctaccaaatgtgtatcaacttccaattcaaactcagag
tctcagttccatcaaatgtcacttttagatagtattttacaaggaaaacttccatgtgat
ttggacaaatctaatcctacatatgatatactatctttattacgtgtacttgagggattg
aatcagcttgctcctcgcttgagggctcaaatagtgtcagatcaatttgcagagggaaag
atcactacgcttgatgaattgggtggaattggaggaaaggttcctcatgaggaatttgtc
aacagtaagcttactcccaaattgactcgacaaattcaagacgctcttgcactgtgcagt
gggagccttccttcatggtgttatcaattgactaaggcatgcccgttcttgtttcctttt
gagacacggcgacaatatttttattcaactgcatttgggttgtcacgtgcgttatatcgg
ctacatcagcagttaggagctgatggtcttggaacagtaaatgaacgagagggaagggtt
ggaagattgcagcgccaaaaggttcgtgtctcccgtaatcgtatactggattctgctgtg
aaagttatggagatgtattctaaccagaaggctgttcttgaagtagaatattttggtgaa
gtgggaactggattaggtcctacccttgaattctacacacttttaagtcatgaattgcag
agggctggacttggaatgtggaggtctaattcattgcaagagtcaatagatagtggtgaa
gatggacagctcaggaagcctaaagatggctctaagcttatttctgatgcaggcaatatt
gatatcatccaatctcctcttgggttgtttccacgaccttggccaccaaatgctgattct
tctgatggcagccaattttcgaaggttattgaatatttccggcttgttggtcgtgtgatg
gctaaggctttgcaagatggaagactattggatctaccactctcaacagcattttataag
cttgttcttggtcaagatcttgatttgtacgatatcctctcatttgaccctgagcttggg
aagactctacaagaactgcaggctcttgtctgccggaaacagtatttaggattggtagat
ggtgacaatcaaaatacaatttccaacttatctttccgtggcattccagttgaagatctc
tgcttggattttacagttcctggctatccggactacgttttgagaccaggagatgaaact
gttaatattcataacttggaggagtacatatccttagtattagatgcaactgtcaagact
ggaataatgcggcaaatggaagcatttactacaggattcaatcaggtttttgacatcact
gcattacgcatattcattccccatgaattggaccatttgctatgtggccgtagagaattg
tggaaggctgacacacttgttgatcatattaaatttgatcatggatacacagccaaaagt
cctgccatagtcaattttcttgagattatgggcgaactcacaccggagcagcagcgagga
ttctgccaatttgttacaggtgcacctaggcttccaccaggtggcctcgcagtgctgaat
ccaagattgactatcgtgagaaagcactcatcaactgcaacaaacgcagcaaacagtgcg
acaggggtatctgaatcagcagacgatgatttgcctagtgtcatgacatgcgccaattac
cttaagcttcctccatactcgaccaaggaaataatgtacaagaaactaatgtatgcgatc
aatgaggggcaaggatcatttgatttgtcatga
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integrated database retrieval system
