Cucurbita moschata (crookneck pumpkin): 111448282
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Entry
111448282 CDS
T05248
Name
(RefSeq) nuclear cap-binding protein subunit 2-like isoform X1
KO
K12883
nuclear cap-binding protein subunit 2
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03013
Nucleocytoplasmic transport
cmos03015
mRNA surveillance pathway
cmos03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111448282
09122 Translation
03013 Nucleocytoplasmic transport
111448282
03015 mRNA surveillance pathway
111448282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmos03019
]
111448282
03041 Spliceosome [BR:
cmos03041
]
111448282
Messenger RNA biogenesis [BR:
cmos03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
111448282
Spliceosome [BR:
cmos03041
]
Common components
Common spliceosomal components
Cap binding complex
111448282
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
DUF5721
Motif
Other DBs
NCBI-GeneID:
111448282
NCBI-ProteinID:
XP_022943536
UniProt:
A0A6J1FX36
LinkDB
All DBs
Position
Unknown
AA seq
251 aa
AA seq
DB search
MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEI
KKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRADFDWGFQDGRQWG
RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSVPSVIPQYGKHGG
SHGNGPRHGRDYHNRKRYRDDDRHAHESSKRTSDYDSRRNPDHESRPQKNPRFRESGDSD
EEDDDDRKQRH
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgttgttcaaggacccatcaaagctatctgtataccgggatagaagatttcag
ggaacccaagatgaatttgaactggctcttcagacttcaaccaccgtttacgtgggaaat
atgtccttttatacaacagaagagcaagtttatgagcttttttctcgagctggagaaatt
aagaagataatcatgggtttggataagaattcaaaaacaccttgtggcttttgttttgtc
ctatactattctcgggaggataccgaggatgctgtaaaatatataagtggaacaattctt
gatgatcggcccatccgtgcggattttgattggggatttcaggatggcaggcaatggggt
cgtggtcgaagtggtggacaggtgcgtgatgaatatcgaacagactatgatcctggtaga
ggtggctatggaaagttagttcagaaagagttggaagcacagaggcagcttgtggattac
ggtactggttcactaggctctgtgccgtcagtcataccgcagtacggtaaacatggtgga
agccacggaaatgggcctcgtcatggaagagattaccacaatcgtaagcgctaccgagat
gatgatcggcatgcccatgaaagctccaagagaacttcagattatgactctagaagaaat
cctgatcatgaatcaagaccgcagaaaaatccaaggttccgggagagtggcgattctgat
gaagaggatgacgatgaccgaaaacagcgacactaa
DBGET
integrated database retrieval system
