Cucurbita moschata (crookneck pumpkin): 111448342
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Entry
111448342 CDS
T05248
Name
(RefSeq) coatomer subunit alpha-1-like isoform X1
KO
K05236
coatomer subunit alpha
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmos04131
]
111448342
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmos04147
]
111448342
Membrane trafficking [BR:
cmos04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
111448342
Exosome [BR:
cmos04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111448342
Exosomal proteins of bladder cancer cells
111448342
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
TPR_COPA_B
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Zn_ribbon_19
Aa-Ago_N
Motif
Other DBs
NCBI-GeneID:
111448342
NCBI-ProteinID:
XP_022943628
UniProt:
A0A6J1FUX2
LinkDB
All DBs
Position
Unknown
AA seq
1219 aa
AA seq
DB search
MLTKFETKSNRIKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDVLR
LSQMNADLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNDTKAWE
VDTLRGHMNNVSCVMFHPKQDIIVSNSEDKSIRIWDATKRTGLQTFRREHDRFWILAAHP
EMNLLAAGHDSGMIVFKLERERPAFAISGDSLFYVKDRFLRCYEFSSKKDSQVIPIRRPG
STSLNQSPRTLSFSPTENTVLICSDLDGGCYEFYTIPKDSFGRSDSFQDAKRGLGGSAVF
VARNRFSVLDKSHNQVLLKNLKNEVVKKVPIPITADAIFYAGTGNLLCRAEDRVVIYDLQ
QRIILGDLQTPFVKYVVWSNDMESVALLSKHAIIIANKKLVHQCTLHETIRVKSGAWDDN
GIFIYTTLNHIKYCLPNGDSGIIKTLDVPIYITKVSGSTLFCLDRDGTVRSFSIDATEYI
FKLSLLKKRFDHVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNLALESGNI
QIAVASATAIDEKDHWYRLGVEALRQGNAGIVEYTYQKTKNFDRLSFLYLITGNTAKLSK
MLKIAEVKNDVMGQFHNALYLGDVRERIKILENVGHLPLAYITASTHGLHDVAERLAAEL
GDDIPSLPEGKTASLLLPPTPVMCSGDWPLLRVMKGIFEGGLDNVGGGRADEDDYEVADG
DWGEELEVVDVDGLQNGDVSAILEDGERAEEDEEEGGWDLEDLELPPEADTPKVSVSSRN
SVFVAPTPGLPANQIWIQRSSLAAEHAAAGNFDTAMRLLNRQLGIKNFAPLKPIFLDLHA
GSQTYLCASSSAPIISLAVERGFSESSNANTKGSPALIYSFTQLEEKLKAGYKATTSGKF
AEALRLFLTILHTIPLIVVESRREVDEVKELIIIVKEYVLGLQMELKRRELKDNPVRQME
LAAYFTHCNLQLPHLRLALLNAMTVCYKAKNLASAANFAHRLLETNPSIENQAKTARQVL
QAAERNMTDASQLNYDFRNPFVTCGATYVPIYRGQKDVACPYCSSRFVPGQEGQICTVCD
LAVIGADASGLLCSPTQNR
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgaagtttgaaacgaagagtaatagaatcaaagggttgagtttccacagtaag
aggccatggatccttgcaagtcttcacagcggagtgatccagttatgggattaccggatg
ggcacgcttattgatagatttgatgagcatgaggggcctgttcgcggtgttcactttcac
aagtctcagcctctttttgtgtccggaggggatgattataagattaaagtgtggaactat
aagactcatagatgcttatttactcttcttggacaccttgattatatacgtactgtgcaa
tttcaccatgagtatccatggattgtaagtgctagtgatgatcagactatccgtatatgg
aactggcagtctcgtacttgtatctctgtgttgacgggccacaatcactatgtaatgtgt
gcttcattccaccctaaggaagatcttgttgtgtccgcttccctagatcagactgttcgt
gtttgggacattggtgctttgaggaagaagactgtatctccggcagatgatgtcttgcgg
ttgagtcaaatgaatgctgatctatttggtggagttgatgctgttgttaaatatgtcttg
gaaggtcatgatcgaggggttaattgggcagcattccatcctaccctgccattgattgtg
tctggagctgatgatcgacaggtgaaattgtggcgaatgaatgacacaaaagcatgggaa
gtggacacactaagggggcacatgaataatgtttcatgtgtgatgttccatcccaaacaa
gatataattgtttccaattcagaggacaaaagcattcgtatttgggatgctacaaaacga
actggacttcagacatttcgtcgagagcacgatagattttggattctcgctgctcatcct
gagatgaatctattggcagctgggcatgacagtggcatgattgtctttaagctggagaga
gaaagaccggcatttgctattagtggcgattctttattttatgtgaaggaccgcttttta
cgctgctatgagttctcctctaagaaagattcacaggtcatcccaattcgaaggcctggt
tcgactagcttgaatcagagcccaaggaccctttcatttagccctacagaaaacacagtt
cttatttgctcagatctggatgggggatgttatgaattttacaccatacctaaggatagc
tttggtagaagcgatagcttccaagatgcaaagagaggacttggaggatcagcagtgttt
gtggctcggaataggttttctgtgctagataaaagtcacaaccaagtcttgttaaaaaat
cttaagaatgaggttgttaagaaggtccccattcccattactgcagatgcaatattttat
gctggaactggtaatttattgtgtagagcagaggatagagttgttatatatgatcttcaa
cagagaattattcttggtgatctccaaaccccttttgttaagtacgttgtttggtcaaat
gacatggagagtgttgcattgcttagcaaacatgcaattattattgccaacaagaagctt
gttcaccagtgcacacttcatgagacaattcgtgtaaagagtggagcatgggatgataat
ggcatttttatttacactaccctaaaccacattaagtattgcctccccaatggagatagt
ggaataatcaaaaccctcgatgttccaatatatattacaaaggtttctggcagtactctt
ttttgcttggatagggatggaacagttcgatcgtttagtattgatgcaacagaatacata
ttcaaactctctctcttgaagaagagatttgaccatgtcatgagcatgataaggaactca
cagctctgtgggcaagcaatgattgcatatttgcaacaaaaggggtttcctgaagttgct
cttcactttgtgaaggacgagagaaccaggttcaatttggctcttgagagtggaaacatt
cagattgcagttgcatctgctacagcaattgatgagaaagatcattggtataggctgggt
gtggaggctcttcgccaaggcaatgcaggcattgtggaatatacctaccagaagacaaaa
aattttgataggttatcgttcctttatctcataactggtaacacggcaaaactgtccaag
atgttaaagattgctgaagttaagaatgatgtcatgggtcaatttcacaatgctctttat
cttggtgatgttcgtgagcgcataaagatcttggagaatgttggccatttacctcttgca
tatatcacagcatcaacacatggtttacatgatgtagctgaaaggctagctgctgaattg
ggagatgacattccatctttaccagaaggcaagactgcatccctcctcttacctcctact
ccagtcatgtgcagtggtgattggccacttctgagagtcatgaaaggaatatttgaaggt
gggctggataatgtgggtggaggccgtgctgacgaagatgattatgaggttgcagatggt
gattggggtgaggagctggaagtggttgatgtcgatggcttacagaatggggatgtctca
gcaattttggaggatggggaacgtgcagaagaagatgaggaagaagggggatgggaccta
gaagatttggagctcccacctgaagctgacactccaaaagtatcagtcagttctcgcaat
tcagtttttgtggccccaactcctggtctgcctgccaaccagatttggatacagaggtcg
tctctcgctgcagaacatgctgcagctggtaattttgatactgcaatgcggttgcttaac
aggcaactaggaattaaaaactttgctcctttgaaacccatatttctggatcttcatgct
gggagtcaaacctatctttgtgcctcatcatctgctcccataatatcattagcagttgaa
cgaggattcagtgaatctagtaatgcgaatacaaaaggatcccctgcacttatttacagt
ttcactcagttggaggagaagcttaaagctggttacaaggccacaacatcaggaaagttt
gctgaagctcttcgtctttttcttactattcttcataccatccctctgatcgttgtcgag
tctaggagggaagtcgatgaggtgaaggagttgatcattatcgttaaagagtatgttttg
ggtttgcaaatggaactgaagagaagggaactcaaggacaatccagtacgtcagatggag
cttgcagcctatttcacgcactgcaaccttcaattgccacatttgaggcttgctctatta
aatgccatgactgtctgttacaaggctaagaaccttgccagtgctgctaacttcgctcac
aggcttcttgagactaacccctcaattgagaatcaagccaagacagccaggcaagtgcta
caggctgcagagaggaatatgacagatgcctcccaactgaattatgactttagaaaccct
tttgtgacctgtggagcaacttatgtgccaatctatcgaggacagaaggatgtcgcttgc
ccatactgtagttccaggtttgtgccgggtcaggaaggacaaatttgtactgtttgtgat
cttgctgttattggagctgatgcgtctggtttactttgttctcccacccaaaatcgatga
DBGET
integrated database retrieval system
