KEGG   Cucurbita moschata (crookneck pumpkin): 111448358
Entry
111448358         CDS       T05248                                 
Name
(RefSeq) THO complex subunit 7A-like
  KO
K13176  THO complex subunit 7
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03013  Nucleocytoplasmic transport
cmos03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111448358
  09122 Translation
   03013 Nucleocytoplasmic transport
    111448358
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmos03019]
    111448358
   03041 Spliceosome [BR:cmos03041]
    111448358
Messenger RNA biogenesis [BR:cmos03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     111448358
Spliceosome [BR:cmos03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    111448358
SSDB
Motif
Pfam: THOC7 APG6_N DUF1818 DUF4094 SPATA1_C
Other DBs
NCBI-GeneID: 111448358
NCBI-ProteinID: XP_022943678
UniProt: A0A6J1FSD4
LinkDB
Position
Unknown
AA seq 241 aa
MSVRGRKVSTRGEAVAASYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLE
IEKDGSNHDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINRQILLA
QDDIEDLKKQLEESKIERQHKEECEAIRKLVAAQPPRSVTQKTIVELEKEIAALDAENTA
SSRMLELRKKQFALLLHVVDELQNTIEDEQKSLMEEMRITAEENKIGVDDASGGLEAMAV
D
NT seq 726 nt   +upstreamnt  +downstreamnt
atgtctgtgagagggaggaaagtctccacccgaggggaagcagtggcagcaagttatgct
tttgggcccctcgaagatgatgttattataaaacacaggcttctcacccgtacaacgacc
acaaggggggaacctccattgaagaagctccagaagaagttcacttcctttgttcttgag
attgaaaaggatgggagtaatcatgatgactgtgagaagctttccagagctttcttacaa
gagctatccacatttgaaattcctttgctgaagagtaaagcagttgtggatgcaaatatt
agggaaaaggagagcttccatgagtttaaggatgagataaacagacaaattttgttagct
caggatgatattgaagatcttaagaagcagcttgaagaaagcaaaattgagaggcaacac
aaggaggagtgtgaggcaattaggaaacttgtagcagcacagccacccaggtctgtgaca
caaaagactattgtggagttagagaaagagattgcggcacttgatgcggagaacacagct
agttcaaggatgctggagcttcgcaagaaacaatttgctcttttgttgcatgtggtggat
gagttgcaaaacaccatagaggatgaacagaagagtttaatggaggaaatgagaatcaca
gctgaggagaataagattggtgtggacgatgctagtggaggcctggaagccatggctgtg
gactga

DBGET integrated database retrieval system