Cucurbita moschata (crookneck pumpkin): 111448360 Help Entry 111448360         CDS       T05248                                  Name (RefSeq) E3 ubiquitin-protein ligase COP1   KO K10143   E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27] Organism cmos  Cucurbita moschata (crookneck pumpkin) Pathway cmos04120   Ubiquitin mediated proteolysis cmos04712   Circadian rhythm - plant Brite KEGG Orthology (KO) [BR:cmos00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     111448360  09150 Organismal Systems   09159 Environmental adaptation    04712 Circadian rhythm - plant     111448360  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:cmos04121]     111448360 Enzymes [BR:cmos01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      111448360 Ubiquitin system [BR:cmos04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     111448360   Multi subunit type E3    Cul4 complex     Target recognizing subunit (DCAF)      111448360 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_RIG_2nd EIF3I Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_DCAF4 zf-C3HC4_2 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_HPS5 zf-C3HC4 WD40_MABP1-WDR62_1st WD40_RFWD3 WD40_like Beta-prop_CAF1B_HIR1 zf-C3HC4_3 zf-RING_2 Beta-prop_NUP159_NUP214 Beta-prop_WDR75_1st Beta-prop_WDR35_TULP_N Beta-prop_DCAF12 zf-RING_UBOX Beta-prop_SCAP U-box zf-C3HC4_4 zf-RING_5 Beta-prop_NWD2_C DUF1664 DDRGK Motif Other DBs NCBI-GeneID:  111448360 NCBI-ProteinID:  XP_022943684 UniProt:  A0A6J1FV28 LinkDB All DBs Position Unknown AA seq 675 aa AA seqDB search MDEGSTGALVPAVKTEPLSSTISAPSIPDCSLAELDTVGEASAQLDKDFLCPICMQIIRD AFLTACGHSFCYMCIITHLRNKSDCPCCAQHLTSVQLFPNFLLDKLLKKTSAHQIAKTAT PIELFRRALQEGCDVSIKELDSLLSMLSEKKRKMEQEESDRNMNILTDFLHILRKQKVSE LNEVQTDLQFIKADISAVERHRMELYCARDRYSMKLHMAGDDMKAREPWSSLTDKRNDGP TSTSLNTWGVVSAGNFQNKKADSRSQVSTYGLYRKDALNGPEPQANHTGLSVARKKRVHA QFNDLQECYLQKRRQLPNQLLDQQEKDKNVIHREGYTAGLSDFQSVLTTFTRYSRLRVIA ELRHGDLFHSTNIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNESTDVHCPIVEMSTR AKLSCLSWNKLSKNIIASSDYEGVVTVWDVNRGQSVLEYEEHEKRAWSVDFSCTEPSRLV SGSDDCKVKVWCMKQENSVLDIDMKANICCVKFNPGSSNHIAVGSADHNIHYYDLRKISH PLHVFTGHKKAVSYVKFLSNSELASASTDSTLRLWDVKENLPVRTFRGHTNEKNFVGLTV NKEYIACGSETNEIFVYHKEISRPLTWHRFGSPDAADVEDDVGSYFISAVCWKSNSPTIL TANSQGTIKVLVLAV NT seq 2028 nt NT seq  +upstreamnt  +downstreamnt atggacgaaggatcaaccggagccttggttccggcggtgaagacggagcctctttcttcg acgatttcagcgccgtcaattcccgattgctcactggcggagctcgacactgtcggcgaa gcttcagctcagttggataaggacttcctctgcccgatttgcatgcagatcattagggat gcgttcctcactgcctgcggccacagtttctgctatatgtgcatcatcactcatctccgc aacaagagcgattgcccctgctgtgctcaacatctcacctccgtccagctgtttcctaac ttcttgcttgacaagctactgaagaagacgtctgctcatcaaatagcaaaaactgcaacc cccattgaactttttcgccgtgctttacaagagggctgtgatgtgtcaattaaggagttg gattccctcttgtcaatgctttctgagaagaagagaaagatggaacaagaagaatctgac agaaatatgaatatattaacagatttcttacatatcctgaggaagcaaaaagttagcgag ctcaatgaggtgcaaactgatcttcagtttattaaggcggacataagtgcagtggagaga cataggatggaactttattgtgcaagggacaggtattctatgaagctacatatggctgga gatgatatgaaagctagagaaccttggtcgtcattaacagataagagaaatgatgggcct acctctacttctttgaacacctggggtgttgtatctgctggaaattttcaaaataagaaa gcagattcaaggagtcaagtcagcacttatggactctacagaaaggatgcattaaatggg ccagaaccacaagcgaatcatactggtctatctgttgcaaggaaaaaacgggtccatgct cagttcaatgacctacaagaatgttatctgcaaaagcgacgtcagctgccaaatcaactg ctagaccagcaggaaaaggataaaaatgttatacacagagaaggatatactgcaggcctt tcagattttcaatcagtattgactaccttcacgcgatacagtcgcttgagagtcattgct gaacttagacatggagatctatttcactccaccaacatagtatcaagcattgaatttgac cgagatgatgaattattcgctactgctggagtttctcgatgcataaaagtgttcgacttc tcttcggttgtaaatgaatctactgatgtccactgtcctatagtggaaatgtcaacacgt gcaaaactaagttgtttgagttggaacaaactatcaaaaaacattatagctagcagcgat tacgagggtgtggtaacagtttgggatgtaaatagagggcagagtgtgttggagtatgaa gagcatgaaaaacgtgcttggagtgttgatttttcatgtacagaaccgtcaaggttggtg tctggtagtgatgattgcaaggtcaaagtttggtgcatgaaacaggagaacagtgtcctt gatatcgacatgaaggccaatatctgttgtgtcaaattcaatcctggatccagcaatcac attgcagttggttcagcagatcataatattcattattatgacctaagaaaaatcagccat ccacttcacgtcttcactggtcacaagaaagctgtctcatatgtaaaatttttatcgaac agtgagctagcctctgcatcgacagacagcaccttacgattgtgggatgtaaaggaaaat ctgccagttcgtacctttagaggtcatacaaatgagaaaaactttgttggtctcacagta aataaagaatacattgcttgtggcagtgaaacaaatgaaatctttgtctaccacaaggaa atatccagacctctgacatggcatagatttggctcacctgatgcagccgatgtggaggat gatgtgggatcttatttcatcagtgctgtttgctggaagagtaacagtcctactatcctc actgctaacagccagggaacaattaaggtgctggttcttgcggtttaa

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