Cucurbita moschata (crookneck pumpkin): 111448439
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Entry
111448439 CDS
T05248
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1-like
KO
K13103
tuftelin-interacting protein 11
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmos03041
]
111448439
Spliceosome [BR:
cmos03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
111448439
Other components
Complex C specific factors
111448439
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
111448439
NCBI-ProteinID:
XP_022943799
UniProt:
A0A6J1FVC1
LinkDB
All DBs
Position
Unknown
AA seq
871 aa
AA seq
DB search
MDDYQEMERFGMENDYDDGQWIGGEFYYRKRKEKRSQTKDDVLYGVFATGSDSDSDGDGF
SSRKRRKDRDLSRKPDLTKPVNFVSTGTVMPNQEIDKISKDGDAENVEDNRPGLGLGSST
SGSGLGFSSSTADRNLDGFKENGSTVDGDEGGDDFFLPTAFGRKIKEGAERRERERVKSQ
IEKKSQVVAGGRKDSDTGNVGAFEKHTKGIGLKLLEKMGYKGGGLGKNKQGIVAPIEAKM
RPKHMGMGFNDFKEAPKVQALQELEEKTLPQPTTKAKERLWSKQVRSKKKKEAYLTAEEL
LASKQDQALEVVQKVFDMRGPQVRVLTNLENLNAEEKARENDIPMPELQHNVRLIVDLAE
LDIQKIDRDLRNEKETALSLQEEKEKLEIELARQKKQMDSMEEIMSMIERIGEDNSAGTL
TLDGLAKCFSGLQRKFSDEYKLCNLSCIACSFALPLFIRVFQGWDPLQNPSHGLEVILLW
KTLLQDEDCVDIWDVTSPYTLLVSEVVLPAVRISGINTWQARDPEPMLRFLESWEKLLPP
SVLHTVLDNVVMPKLASAVDLWEPQRDPVPIHMWVHPWLPLLGHKLEGMYQVIRTKLSFV
LGAWHPSDASAYTILSPWKAVFDSASWEQLMCRFIVPKLQLVLQEFQVNPGNQKLDHFYW
VTSWASAIPIHIMVDMMEKFFFSKWLQVLYHWLCSNPNFEEVTKWYMGWKELFPKELLAN
ESIRYQLSCGLDMMNQAVEGMEVVQPGLKENISYLRVLEQRQFEAQQKAAAQAKQQGSAG
LGNASHLDSMGDTVEMTLKEVLEAHAQQYGLLFKPKPGRMHNGHQIYGFGNVSIIVDALN
QKVYAQTEESWSLVSLERLLDMHTSSTAKRW
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggatgattatcaagaaatggagaggtttggtatggagaatgattacgatgatggccaa
tggattgggggcgagttttattaccgaaagcgcaaagagaagaggtcccaaacgaaagat
gatgttctttatggtgtgttcgcgactgggtcggattcggactctgatggtgatggattt
tcgtctcggaagcgccgcaaggaccgcgacttgtctaggaaacctgacctcaccaagcct
gtcaattttgtatccaccggcaccgtcatgcccaaccaggagattgataagatttccaag
gatggagatgctgagaatgtggaagataaccggcctggccttggcttgggctctagcacg
tctggttctggcctgggttttagttcttcgactgctgacagaaatcttgatgggtttaag
gagaatggttctactgttgatggagatgaaggtggtgatgacttctttttgcccactgcg
tttgggagaaagataaaggagggagctgaaaggagggagagggaaagagtgaaatcacag
atagagaagaaaagtcaagtggtagccgggggaagaaaagattctgacactgggaatgtt
ggagcctttgagaagcataccaagggcatcggtctgaagctactcgaaaaaatgggatac
aagggaggtgggcttggaaaaaacaaacaagggattgtagctcctatcgaagctaaaatg
aggcctaagcatatgggtatgggttttaatgacttcaaagaggcacctaaggtacaagct
ttgcaggaacttgaggagaaaacattgccccaaccaacgacgaaggcaaaggagaggcta
tggtcgaagcaagtaaggtctaaaaagaagaaagaagcatatttaacagctgaggaatta
ctggctagcaagcaggaccaggcattggaggttgttcaaaaggtgtttgatatgcgtggt
cctcaggtgcgggtgttaacaaatttagagaacttgaacgctgaagagaaagcccgagaa
aatgacatccctatgccagagcttcagcataatgtgaggttgattgtagatttggctgag
ttggatattcaaaaaattgatagagatttgagaaatgagaaggaaactgcactgagccta
caggaagagaaggaaaagttagagattgagctggctcgtcagaagaagcagatggatagt
atggaagaaattatgagcatgatagaacgaataggagaagataattctgctggaacattg
acattagatggacttgctaagtgcttcagtggcttgcagagaaaatttagtgatgagtac
aagttatgtaacttgtcttgcattgcatgttcatttgcactacctttgtttattagagta
tttcagggctgggatcctcttcaaaatccttctcatgggttagaagtgatattgttgtgg
aagactctccttcaagatgaagactgtgttgacatttgggatgtgacgtcgccttatact
ctcctggtttcagaagtcgtgctacctgccgtacgaatctctggcataaatacttggcag
gctagggatcctgaaccaatgcttcggttcttagagtcttgggaaaaattgctgcctcct
tcagtccttcataccgtattggacaatgttgtcatgcctaaacttgcaagtgcagtagat
ttgtgggaacctcagcgagatcctgttcctatccacatgtgggtacatccatggctgcca
ttgttagggcataagctggagggtatgtatcaggtcatacgtacaaagttgagttttgtt
cttggtgcttggcacccgagtgatgcttctgcctatactatattatcaccctggaaagct
gtatttgattctgctagttgggagcagcttatgtgtcgatttattgtacctaaattgcag
cttgtcttgcaagaattccaagttaatccaggaaatcagaaacttgatcatttttactgg
gttactagttgggcttctgccatacctatccacatcatggttgatatgatggagaaattc
ttcttctccaagtggctacaggtattgtatcactggttatgttcaaatccaaattttgag
gaggttacaaagtggtacatgggctggaaagaactcttcccaaaggagcttctggctaat
gaaagtatcaggtaccagcttagttgtggcctggatatgatgaatcaagccgttgaaggg
atggaggtagttcagccaggtttgaaagagaatatttcttaccttcgggttcttgagcaa
cgacagttcgaagctcagcagaaagctgctgcgcaagctaaacaacaaggctcagctgga
ttgggtaatgcttctcatttggacagtatgggtgatacagttgagatgactctgaaagaa
gtacttgaggcccatgctcaacagtacggtttgctctttaagcctaaacctggaagaatg
cacaatgggcaccagatatatggctttggaaatgtaagcataatagttgatgctctaaat
caaaaagtgtacgcccaaactgaggaatcatggtccctagtatcccttgaacgattactg
gacatgcacactagttctacagcaaagagatggtag
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