Cucurbita moschata (crookneck pumpkin): 111448448
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Entry
111448448 CDS
T05248
Name
(RefSeq) pre-mRNA-splicing factor syf2-like
KO
K12868
pre-mRNA-splicing factor SYF2
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111448448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmos03041
]
111448448
Spliceosome [BR:
cmos03041
]
Complex B
Other components
Prp19-related factors
111448448
Complex C
111448448
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SYF2
Motif
Other DBs
NCBI-GeneID:
111448448
NCBI-ProteinID:
XP_022943827
UniProt:
A0A6J1FXE9
LinkDB
All DBs
Position
Unknown
AA seq
315 aa
AA seq
DB search
MSDEGRVHPDCRNASNPYHECTEYCFKVIAEVKARNQQNEPVPTSSEGVQAGRSSGSSNF
VPPDEYEDLRDEKPNEEGHSDGDTDKFSGGENVEGDFTKLTGRKKKLFEIRLKMNEARKA
NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMSKAYMLDTQEAAESK
YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK
APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
LEIKNNLERGTALPD
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatgaaggaagagtacaccctgattgtagaaatgcttctaatccttatcatgaa
tgcaccgaatactgttttaaagtaatagctgaagtcaaagcccggaatcagcaaaatgag
ccagttcccacatcatcagaaggtgttcaagctggtcgaagtagtggttcttctaatttc
gtgcctcctgatgagtatgaagatcttcgtgacgaaaagcctaatgaagaagggcacagt
gatggtgatactgacaaatttagtggtggggagaatgtggaaggagacttcacaaaactc
acggggaggaaaaagaaattgtttgaaattaggcttaagatgaatgaggcgcgcaaagct
aatcaaacagcaattgctgctgaaaaaaagaaaatggaacctccatcagaatcaagaggc
atttctaaacaaaagtggcttgaggatcggaagaagaaaattggaaagcttttggatgca
aatggtttggatatgagtaaagcatatatgctagatacacaagaggcagcagagtccaaa
tataagaaatgggagaaggatccagctccctatggatgggatgtctttaaccagaaaaca
ttgtatgatgcatacaaaaagaggacaaagaatgtgaatgttgaccttgaggaatataat
aagatgaaagaatctgatcctgagttctaccgtgaggcttcaagtcttcaatatggaaag
gcacctaagatttcagaggataagatagacaatatggtgaaagaactcaaggaccgagag
gagaagcgaaagtcgtttagccgtaggaggaagttccatgaagacaaggatattgattct
atcaatgaccgcaatgagcatttcaacaaaaagattgagcgggcctttggtagatacact
ctggagatcaaaaacaatcttgagcgaggaactgcattacctgattaa
DBGET
integrated database retrieval system
