Cucurbita moschata (crookneck pumpkin): 111448468
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Entry
111448468 CDS
T05248
Name
(RefSeq) nuclear pore complex protein NUP98A-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111448468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmos03019
]
111448468
03036 Chromosome and associated proteins [BR:
cmos03036
]
111448468
Messenger RNA biogenesis [BR:
cmos03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111448468
Chromosome and associated proteins [BR:
cmos03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
111448468
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
111448468
NCBI-ProteinID:
XP_022943867
UniProt:
A0A6J1FU81
LinkDB
All DBs
Position
Unknown
AA seq
1093 aa
AA seq
DB search
MRTVPHLNPYLPAFFCFSLPLFSCSGWWNLSFPYWRQLGFWFFVQCSRFVASITLLRLGI
DRAMFGSPNPFGQPSTSPFASQPVFGQAANASNNPFAPKPFGSTSPFGSQTGNTVFGGTS
TGVFGAAQSSSPFPSNTTFGGSSSPAFGASSTPAFGSSSSSSFGGSSIFGQKPLFGGFGS
TPTQTNPFGNTNQQSQPAFGSNVFGSTSPFGAPSQSAFGATSTPAFGATSTPAFGATSTP
AFGAASTLAFGATSTPAFGATSTPAFGATSTPAFGATSTPAFGSTSTPAFGSTGNAFGSL
STPVFGSGGGFGASSTPAFGASSTPAFGASSAPAFGASSAPAFGASSTPSFSFGSTPAFG
QSTSAFGSSTFGTNTSPFGAQTSPFGAQSTSAFGTSGFGQAGFGGQRGGSRVAAYTPTTE
PDAGSGSSQAAGKLESISAMPVYKDKSHEELRWEDYQSGDKGGPLPAGQSASSGVGFGGS
NAQPNPLASSTFNQSSSPNPFSTATSTNPFAPKSSGFGAFGPSTTFSFNSSAFAPSSSSN
PFASTTAASTSSFLPSTTSQFGSSSLFSSSNAQPLASQSAFSSTTSPGTNLTFPSSLNFS
NTQTSSLFQSTTPSIGQTGSAFGAPFSQSSLFSQPSSGVGGNLFSSSPSLLTSSNPMGFG
QTSGSFSMPFQPAQAQAPTSFFSNLGQAQPIGSSGFAGTSSMFGQSNFGQSPITQSPAVQ
PAPATNPFGTLPAMPQMSISRPGAAPSIQYGISSMPVVDKAAPVRISTFLTPRHLSNRRM
RLPVRKYNPKNDGSPRVPFFSDDEETPSTPKADALFIPRENPRALVIRPTDQWPSRASLE
KALPSKDTSVRENGKIAEDTSSSAVNNLKDTNGNVVENGSCKDNIHVNKVNQKPNGVHED
HPASKEDCYRTFGGYRAGEAAIVYEHGADIEALMPKLRHSDYYTEPKIQELAAKERAEPG
FCRRVKDFVVGRHGYGSIKFFGETDVRRLDLESIVQFNNREVIVYLDESKKPPCGQGLNK
PAEVTILNIKCIDKQSGNQYTEGPKVEKYKELLRKKTEGQGATFISHDSVKGEWKFRVEH
FSRYNMEEVEDWE
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgcgcactgttcctcatctaaatccctatcttcctgcatttttctgtttttctctaccc
ttgttttcctgttctggatggtggaatttgtcgtttccttattggaggcagctgggtttt
tggttcttcgttcaatgttcgagattcgttgctagcattactctgttgcgcctgggaata
gacagagcgatgtttggttctcccaacccttttgggcaaccgtctaccagcccttttgca
tctcaaccagtctttgggcaggctgccaacgcaagtaataatccttttgcaccgaagccc
ttcggcagtacatccccatttggctcacagacaggaaatacagtatttggtggtacatca
accggtgtgtttggggcagcccaatcttcttccccctttccttccaacacaacatttggc
ggttcatcgtcaccagcttttggagcatcgtcaactcctgcttttggtagttcatcatct
tcatcatttggaggttcttccatttttgggcagaagcccctatttggaggctttggatct
actcccactcaaacaaatccatttggaaatacaaaccagcaatctcagccagcatttgga
agcaatgtctttggttccacatcaccttttggcgcccctagtcaatctgcatttggagct
actagcactcctgcctttggcgctacaagcacccctgcctttggtgccacaagcacccca
gctttcggtgccgcgagcactctggcatttggtgccacaagcaccccagcttttggggcc
acaagtacaccagccttcggtgcaacaagcaccccagcctttggcgctacaagcactcct
gcctttggttcaacaagcactcctgccttcggtagtactgggaatgcatttggttcatta
agcacccctgtttttggatctggtggtggttttggtgcttctagtactcctgcttttgga
gcttcaagtactcctgcttttggggcttcaagtgctcctgcttttggggcttcaagtgct
cctgcttttggagcttctagcactccatcctttagctttgggtccactccagcgtttggc
cagtctacttctgcatttggtagtagcacttttggtactaatacatctccttttggagcc
cagacctctccttttggagcacagtctacatctgcatttgggaccagtggttttgggcag
gctggttttggtggtcagcgtggtggcagtagagtagctgcatatacaccaacaactgag
ccagatgctggaagtggcagttcacaagcagctggaaagttggagtctatatcagccatg
cctgtttacaaagataaaagtcacgaagagttgagatgggaggattatcaatcgggagac
aaaggtggacctcttccagctggtcagtctgctagtagtggtgttggctttggtggttct
aatgcacagcctaaccctctagcttcttcaacatttaatcaatcatcaagtccaaatcct
ttttctacggccacatcaaccaatccatttgcccctaaatcttctggttttggtgctttt
ggaccttcaacgacgttttcatttaattcttcagcatttgctccttcctcttcatcaaac
ccctttgcatcgacaacagcagcatcaacatcctctttcctaccatcaacaacctctcaa
tttggaagctcatctctattcagttcatctaacgctcaaccccttgcctcacagtctgct
tttagttcaactacatctccaggaacaaatcttacctttccatccagcttaaattttagc
aatactcaaacatcttcccttttccaatccacaacaccttcaattgggcagacaggttca
gcctttggtgctcccttttcacaatccagcttgtttagtcaaccttcgtctggggttgga
gggaatcttttctcaagctcgccatcactcctaacttcaagcaatccgatgggttttggt
caaacatctggctctttctctatgccttttcaaccggcacaagcacaggcacccacttcc
ttttttagcaacctgggtcaggctcaaccaattggttcaagtgggtttgcaggaacttca
agcatgtttggccagagtaactttgggcaatcgcctatcacccaaagccccgcagtacaa
ccagcacctgctacaaatccgtttgggacactccctgcaatgccacagatgtcaattagc
agaccaggagcagcaccttcgattcaatatggaatttccagcatgccggttgttgataaa
gcggctcctgttagaatatcaactttcttgacgcctcgccacctatctaacagacggatg
agattgcctgtgagaaaatataatcctaagaatgatggcagtcccagggttccatttttc
agtgatgatgaagaaacaccaagtacaccaaaggccgatgctctttttattcccagagag
aatcctagagcattggttattcgtcccactgatcagtggccttcaagagccagtttagag
aaagcattgccatcaaaggatacctcagtgcgtgaaaatgggaagattgctgaagatact
tcctcctcggctgtcaacaatttgaaggataccaatggaaatgttgttgagaatggtagt
tgcaaagacaacattcatgttaacaaagtaaaccaaaaacctaacggtgtccatgaggac
caccctgcttcaaaggaagactgttataggacatttggagggtacagagctggtgaggct
gccattgtttatgaacatggggcagatattgaggcattaatgccaaagctccgacattca
gattattataccgagccgaaaattcaagaattagctgccaaagaaagggccgaacctggg
ttttgccgccgtgtgaaagattttgtggtgggtcgccatggttacggaagcatcaaattc
tttggtgaaacagacgtgcgaaggctggatctagagtccattgttcaatttaacaatcgc
gaagtgatcgtgtacctagacgagagcaagaaacccccttgcgggcaaggtctgaataag
ccagctgaagtaacaatactgaacatcaaatgcatcgacaagcaaagcgggaatcagtat
acggaagggccgaaagtagagaaatacaaggagttgctaaggaagaagacggagggtcaa
ggtgcgacgttcatatcccacgactcagtgaaaggggaatggaagttcagggttgaacat
ttcagcaggtataacatggaggaagttgaagattgggaatga
DBGET
integrated database retrieval system
