Cucurbita moschata (crookneck pumpkin): 111449066
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Entry
111449066 CDS
T05248
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111449066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmos03019
]
111449066
Messenger RNA biogenesis [BR:
cmos03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
111449066
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
SET1_RBD
Motif
Other DBs
NCBI-GeneID:
111449066
NCBI-ProteinID:
XP_022944676
UniProt:
A0A6J1FV25
LinkDB
All DBs
Position
Unknown
AA seq
477 aa
AA seq
DB search
MQTDSGKLFVGGISWDTDEDRLKEYFSAFGEVVEAVIMKDRTTGRGRGFGFIVFADPSVA
DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES
EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR
AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRMDGRFSPVSSGRS
VFTPFSSGYGMGVNFEIGLNPGYGGSSNFTNNLNYGRGLSPYYTGNSDRFGNIGYESGNG
GNSSFFSSATQNLWGSGGLNNGTNSANSNAHLGSASVGGGIGGTAFANSGVNWGSSGILS
QGGGNNVFSNSANHNYGGIDSSYSIGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFYN
ASYGDLTWRSSNFERDVSGPFGYGLGNAASDVSSRSSPGFIGGHSVNRRQSNRGNTT
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgcaaactgatagcggcaaattatttgttggtgggatatcttgggatactgatgaagac
cggcttaaagagtatttcagtgcctttggggaggttgtagaagctgtcattatgaaggat
cggactacaggtcggggtcgaggcttcggcttcatagtttttgctgatccaagtgttgca
gatagagttataagggagaagcataatattgatggaagaatggttgaggcgaaaagggct
gttcctagaaacgaccagaacattgtaggtagaaccagtggtagcattaatgtttctcct
ggtcctggacgaactagaaagatatttgttgggggcttagcatctactgttacagagagt
gaatttaagaattattttgatcaattcggaacaattacggatgttgtggtgatgtacgac
cacaatactcttcgacccagaggtttcgggtttattacatatgattcggaagaagcggtc
gagaaagttcttatcaagactttccatgaattgaatggaaaaatggttgaagtcaagcgt
gcagttccaaaagagttgtcaccaggcccaagccgtagtccacttggtggatacaattat
ggtcagagtagggtcaatagcttccttaatggttatactcaggggtatagttcaagtaca
attggaggttatggggttagaatggatggtagatttagtccagtttctagtggtcgaagt
gtattcactccgttcagttcgggttatggaatgggcgtgaactttgagattggcttgaat
ccagggtacgggggaagttccaattttaccaataatctcaattatggacggggactgagc
ccgtattatactggtaattcggatagatttggcaatatagggtatgagagtggcaatgga
ggaaactcatccttcttcagctcagctactcaaaacttgtggggaagtggagggctcaac
aatggaacaaactctgccaactccaatgctcatttgggatcagcaagcgtcggcggcggc
attgggggaactgcatttgcaaattctggagttaactggggtagctccggaatcttgtct
caaggtggaggaaacaatgtttttagtaactctgcgaatcataattatggaggtattgac
agtagttatagtataggagctggaggatatgggaggaacagtggtactgttttgcctcca
acatcatcatttcctacctcaactgtcggttttgacgggccttttgcagatttctacaat
gccagttatggcgatctcacgtggcgatcttccaattttgaaagagacgtctctggaccc
tttggttatggactcggcaatgctgcttctgatgtctcatccagaagctctcctggtttt
attggtggtcatagtgttaataggaggcagtcaaacagaggaaacactacctag
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