Cucurbita moschata (crookneck pumpkin): 111449083
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Entry
111449083 CDS
T05248
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF2-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmos04131
]
111449083
04121 Ubiquitin system [BR:
cmos04121
]
111449083
Enzymes [BR:
cmos01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111449083
Membrane trafficking [BR:
cmos04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
111449083
Ubiquitin system [BR:
cmos04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111449083
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
zf-RING-like
zf-RING_16
Rad50_zn_hook
zf-C3H2C3
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
111449083
NCBI-ProteinID:
XP_022944700
UniProt:
A0A6J1FYT8
LinkDB
All DBs
Position
Unknown
AA seq
384 aa
AA seq
DB search
MSTGTASYWCYRCNRFVRAWVEDTITCPHCDGGFVETIETASSLPAADLHRRLSPSAIHT
LDQDQFPTSRLSSRRSRRRLGERTTFNPIVVVRGSADGGDVVGGGDRNSFDIYYDDGAGS
GLRPVPATMSEFLMGTGFDRLLEQLAQLEINGLGRSENLPASKAAVESMPTIEILESHVG
SDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERESPAGGV
ADRVVDEETVGLTIWRLPGGGFAVGRFSGGRLAGERDPPAVYTEMDGGFNANGAPRRVSW
GSRRSRGRESRGIGRTFRNIFSFFGRLRSSNSSSTAVSNQSEPVSRSHSHSHSHSHSGSS
VFNRYLRRQNRAWAMENQSDNDRW
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccggaacggcgtcgtattggtgttaccgctgcaatcggttcgttcgtgcttgg
gttgaggataccatcacttgccctcactgtgacggcgggtttgttgaaacgattgaaacc
gcctcttctcttccggcggcggatctccaccgtcggctctcaccgtctgcgattcacacc
ttggatcaagatcagtttccgacttctcgcttgagctctcgccgtagtcgtcggagactt
ggggaacggacgacctttaaccctattgttgttgttcgtggttctgcggatggcggcgat
gtggtcggcggcggggatagaaatagcttcgatatttactacgacgacggtgctgggtct
ggtcttcgtccggtgccggcgactatgtcggaatttcttatggggactggattcgatcga
ttgctggaacagttggctcaactggagatcaacgggttaggtagatctgaaaatctgccg
gcgtcgaaagccgctgtggaatcaatgccgacaatcgagattttagaaagtcacgttggt
tccgattcgcactgcgccgtgtgtaaagaggcgtttgaaatcggaacggaagcccgggaa
atgccctgtaaacacatctatcactccgattgcataatcccttggctttccatgagaaat
tcctgcccagtctgccgtcacgagctaccatcagagcgtgaatctccagccggcggagtt
gcagatcgggttgtcgacgaagaaaccgtagggttaacgatctggaggctcccaggcggt
gggttcgccgtcgggcgattctctggcgggagattagccggagaaagagacccaccggcc
gtgtacaccgaaatggacggtggattcaatgcaaacggagctccaagaagggtgtcgtgg
ggttcaagaagaagcaggggaagagagagccgtggaattggacgaacatttcgtaatatc
ttttccttttttgggagattaagatcatcaaattcatcttctacggcggtttcaaatcaa
tcggagcctgtcagtagaagccatagccatagccatagccatagccattcgggttcttca
gtgttcaacagatacttgcgccggcaaaacagagcatgggcgatggagaaccagagcgat
aacgatcgatggtga
DBGET
integrated database retrieval system
