Cucurbita moschata (crookneck pumpkin): 111449089
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Entry
111449089 CDS
T05248
Name
(RefSeq) exosome complex component RRP41-like
KO
K12587
exosome complex component MTR3
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111449089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmos03019
]
111449089
Messenger RNA biogenesis [BR:
cmos03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
111449089
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
111449089
NCBI-ProteinID:
XP_022944714
UniProt:
A0A6J1FYV1
LinkDB
All DBs
Position
Unknown
AA seq
258 aa
AA seq
DB search
MAKKATPATTTYSPSPTTHKTRPPIFRSDDVDWVRPDGRSFHQCRPAFFRTGAVNAASGS
AYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTTFSTPVRGQGSENKEFSSMLH
KALEGAIIFETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSC
FGKNLLIDPALEEENYQDGSLMITCMPSRYEVTQLTITGEWSTAKINEGMQLCLDASCKL
VTIMRSCLKESAATVSEE
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaaaagcgacaccagctacgactacctattctccgtctcctaccacccacaaa
accaggccacccatcttcagaagcgacgacgtcgactgggttcgccctgatggccgaagc
ttccaccagtgccgtcctgctttttttaggactggtgctgtaaatgctgcttcaggatct
gcttatgcagagttcgggaacaccaaggtcattgtttctgtattcggccctagagaaagt
aagaaagcaatgatgtatagtgatattggccggctcaattgtagcgtcagttatacaaca
ttttccactccagttcgtggacagggatcggaaaacaaggagttctcctcaatgctacat
aaagctttggaaggggcaataatattcgagacattccccaagaccactgtggatgtattt
gccttagtgttggaatctggaggcagcgatcttcctgttgtaatatcatgtgctagtctt
gctcttgccgatgctgggattatgctttatgatcttgttgcctcagtttctgtgagctgc
tttggtaagaatcttcttattgatcctgcattggaagaggaaaactaccaagatggaagt
ctgatgataacttgtatgccatctcgttacgaagtcactcagctcactattacaggcgaa
tggtcaaccgctaaaattaatgagggtatgcagctttgtcttgatgcttcgtgtaagctt
gtgacgatcatgcggtcatgcttgaaggaatctgccgccacggtttcagaggaataa
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