KEGG   Cucurbita moschata (crookneck pumpkin): 111449229
Entry
111449229         CDS       T05248                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03010  Ribosome
cmos04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    111449229
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    111449229
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:cmos03011]
    111449229
   04121 Ubiquitin system [BR:cmos04121]
    111449229
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cmos04147]
    111449229
Ribosome [BR:cmos03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    111449229
  Archaea
    111449229
Ubiquitin system [BR:cmos04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   111449229
Exosome [BR:cmos04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   111449229
  Exosomal proteins of colorectal cancer cells
   111449229
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Plexin_RBD Dsc3_N DUF2604 UBL_UBAC1 TBK1_ULD Thioredox_PDIA6_C OTU1_UBXL Fer2_3 Ubiquitin_5
Other DBs
NCBI-GeneID: 111449229
NCBI-ProteinID: XP_022944801
UniProt: A0A6J1GXP3
LinkDB
Position
Unknown
AA seq 156 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDDSGKVQRLRKE
CPNAECGAGTFMANHFDRHYCGKCGLTYVYNKAGGD
NT seq 471 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaaaaccctaacgggtaagaccatcaccctcgaggtcgagagctcc
gataccatcgacaatgtcaaggccaagatccaggacaaggagggaattcccccggaccag
cagcgtctgattttcgccggaaagcagcttgaggacggccgaaccctcgccgactacaac
atccagaaggaatccacgcttcaccttgttctccgtctcaggggaggcgccaagaagcgt
aagaagaagacctacaccaagccgaagaagatcaagcacaagcataagaaggtcaagctt
gccgttctccagttctacaaggtcgatgactctggaaaggtacagaggctgaggaaggag
tgccctaatgccgagtgcggcgctggaactttcatggctaaccactttgaccgccactac
tgtggtaaatgtggtttgacctacgtttacaacaaagctggtggtgattag

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