KEGG   Cucurbita moschata (crookneck pumpkin): 111449361
Entry
111449361         CDS       T05248                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cmos04812]
    111449361
Cytoskeleton proteins [BR:cmos04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     111449361
SSDB
Motif
Pfam: WD40 Katanin_con80 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_EML Beta-prop_SCAP Beta-prop_TEP1_C Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_DCAF4 NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_SPT8 eIF2A Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_IP5PC_F Beta-prop_RIG_1st Beta-prop_VPS8 Beta-prop_WDR19_1st Beta-prop_DCAF12 PROPPIN VPS8_N
Other DBs
NCBI-GeneID: 111449361
NCBI-ProteinID: XP_022944988
UniProt: A0A6J1FZJ9
LinkDB
Position
Unknown
AA seq 896 aa
MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS
GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD
FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR
TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLNVHEGKLLGCSYNQNCVGVWVVDITR
TEPYAINNVNRLNGRSEPKSSSNLSLQNENNPKANFGGLSVSQTSDPLLKETKTLGRLSV
SQNTDVKDPKPLSSTGNGPSTPQRVSSNAGPKANSVSSVAVPNAVVPKRNSVKATSTFNN
PIFNKSDVIPVIVPRTNSRHEQDDSRKDFDVAGRAMPLPRTNSRHEQDDPRKEIDVAGRA
MPLPRTNSRHEQDDSRKELDVAGRAMPLPRTNSRHEQDDSRKELDVAGRAMPLTRTNSRH
EQDDSRKELDVAGRAVPAPLLSKTTDTNRRFPSGRDEVDNSTISILSESRGLKAADMSNI
ADNRNSLHGIGSIQGVSAPQKIVKEERHIGSGKNETETKESTASYKHEDESQGHKISRDG
AFPEATRGGRMRSRVDWEKRERANFSRSTFNASPGRAAALDSLPLNNGRGYRRSPEKETV
APTSEEDIIANVLQQHDQFINSMQSRSAKLQAVYRYWERHDIKGAVSAMEKMADHAVAAD
VISILTDKIEVITLDICSCILPVLSSLLESDLDRFLDIAMEMLLKLVRTFGSVIYSTLSA
TSSVGVNIEAEQRLERCNLCFIELEKVKRCLPALIRKRGSVAKSAQELNLALQEFQ
NT seq 2691 nt   +upstreamnt  +downstreamnt
atgactaccaaacgggcgtacaagctacaagaatttgtggctcattcttccgctgtcaat
tgcctgaagattgggaggaagtcatctcgtgttcttgtcaccggtggtgaagatttcaaa
gtcaatctctgggctatcggtaaacccaacgccatactgagtttgactggccatacgagt
ggaatagattctgtaagctttgactcatcagaagtattggtagctgcaggggctgctagt
ggcacaattaagctttgggatttggaggaggctaaaattgttcgaacacttactggtcat
agatccaattgcatttctgtggattttcatccctttggggaattctttgcttctggatcc
ttggatacaaatcttaagatatgggatatcaggaagaaaggatgtatccacacatacaaa
ggtcacactcgaggggtcaatgcaatcagatttactccagatggtcgttgggttgtatct
ggtggagaagacaacacggtgaagctctgggatctgactgctggaaagttgttgcatgat
ttcaagtgccacgagggtcaggttcagtgtatagactttcaccctcatgagtttctgctg
gcaacaggctcagcagataaaaccgttaaattttgggacctggaaaccttcgagttgatt
ggttcagctggacctgagaccagtggagtccgttgtttaacttttaatcctgatgggagg
acactgctttgtggattgcatgaaagtctgaaggttttctcatgggaaccaatacgatgt
catgatggagtggaagttggttggtctaggctgtctgatcttaatgttcacgagggaaaa
cttcttggctgttcatacaatcagaactgtgttggagtgtgggttgtagacattacgcgt
acagagccctatgcaattaataacgttaacagattaaatggtcgctcagaacctaaatcc
agcagtaatctatcactgcaaaatgagaacaatcccaaggctaattttggtggattatca
gtatcacaaacttctgatccactattgaaggaaactaaaacattgggaagattgtcagtt
tctcaaaataccgatgtcaaggatccaaaaccgttgtcatccacaggaaatgggccaagt
actccccaaagggtcagttcaaatgctggcccaaaggctaattcggttagctcggtggca
gtacctaatgcagtggtacctaagagaaactctgtgaaggccacttcaacattcaacaac
cctatcttcaataaatcagatgtgatacctgtaattgtaccccggacaaattcaaggcat
gagcaggatgattctagaaaggattttgatgttgctggaagagcaatgccactacccagg
acaaattcaaggcatgagcaggatgatcctaggaaggaaattgatgttgctggaagagca
atgccactacccaggacaaattcaaggcatgagcaggatgattctagaaaggaattggat
gttgctggaagagcaatgccacttcccaggacaaattcaaggcatgagcaggatgattct
aggaaggaattggatgttgctggaagggcaatgccacttacaaggacaaattcaaggcat
gagcaggatgactctagaaaggaacttgatgttgctggaagagcagttccagcaccattg
ctatcaaaaactactgatactaataggaggtttccaagtggtagagatgaagttgataat
tcaactatctctatcctttctgaatccagaggtttgaaggctgctgatatgagcaacatt
gcagataataggaattccttgcatggtattggttcaattcaaggagtatctgctccacag
aagattgtaaaagaagaaagacatattggatctggtaagaatgaaacagaaacaaaagag
tcaacggcaagctacaaacacgaagatgaatctcaagggcataaaataagcagagatgga
gcttttccagaagctacaagaggagggagaatgcgttctcgtgtagattgggagaaaaga
gaaagagctaattttagccggtcaacatttaatgcctcccctggaagagcagctgcattg
gacagtcttccactaaataacgggagaggttatcgtcgatctccagagaaggaaacagta
gcacctacaagcgaagaggatatcatagcaaatgttctacaacaacatgatcaattcatc
aactcgatgcaatctcgttcagcaaaattgcaagcagtctatagatattgggaaagacat
gacattaaaggggcggtgtctgcgatggagaaaatggctgatcatgcagttgctgctgat
gtaattagtattttgaccgacaaaattgaagtcatcactctggatatctgcagttgtatt
ctgccagttctttctagcctccttgaaagtgacttggataggtttttggacatcgctatg
gaaatgcttcttaagctggtaaggacgttcggttcggtgatttattcaacgttatcggca
acttcgtctgttggcgtaaatattgaggcagagcaaaggttggagcgatgcaatctctgc
ttcatcgagcttgaaaaagtcaagcgctgcctgccagccctcataagaaaaaggggatca
gtagcaaagtcagcacaggagttgaatctcgcactgcaggaatttcagtga

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