Cucurbita moschata (crookneck pumpkin): 111449471
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Entry
111449471 CDS
T05248
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111449471
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmos04121
]
111449471
Enzymes [BR:
cmos01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111449471
Ubiquitin system [BR:
cmos04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
111449471
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
DUF7567
DZR
FAIM1
Motif
Other DBs
NCBI-GeneID:
111449471
NCBI-ProteinID:
XP_022945143
UniProt:
A0A6J1FZZ8
LinkDB
All DBs
Position
Unknown
AA seq
331 aa
AA seq
DB search
MDLDSIECVSSSDGLDEDEIHLHHTLHSYSHSHHHPELSATKPRNGNNNSAVAGPTATAP
ATSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKV
AESLELPCRYYSLGCPEIFPYYSKLKHEALCNFRPYNCPYAGSECSAVGDIPFLVSHLRD
DHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFL
RFMGDENEARTYSYSLEVGGYGRKLIWEGTPRSIRDSHRKVRDSHDGLMIQRNMALFFSG
GDRKELKLRVTGRIWKEQNPDAGVCIPNLCS
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggatttagatagtatcgagtgtgtatcatcttccgatggtctcgatgaggatgagatc
catctgcatcacactcttcattcttattcccattctcatcatcatcccgagttgtcggca
accaagcctcgaaatggaaacaataatagcgctgtagcaggccccactgccactgcgccg
gccactagcgtccatgaattgctcgagtgccctgtctgtaccaattctatgtaccctccc
attcatcagtgccacaatggacatacattatgttctacatgtaaaacacgggttcataat
cgttgccctacttgtagacaagagcttggagacattaggtgcttagcactggagaaggtg
gcagagtcactggaattgccttgcagatattattccttgggatgcccagaaatatttcct
tactacagtaaactcaagcacgaagcattgtgcaacttcagaccctacaattgcccatat
gctggctcggaatgctctgctgttggggatattcctttccttgtttcccatctgagggat
gatcacaaggtggacatgcacactggatgcacatttaaccatcgctatgtgaaatccaac
ccaagggaagtggagaatgccacttggatgcttacggtttttcattgtttcggtcaatac
ttctgccttcactttgaagcctttcagcttgggatggccccagtgtatatggctttcctt
cgtttcatgggcgacgagaatgaggcgcgaacctacagctacagtctggaggtgggtgga
tatgggcgaaaactgatatgggagggcaccccgcgaagtatcagagatagccatcgaaaa
gtgagggatagccatgatgggctgatgattcaaagaaatatggctctgttcttctcgggt
ggggataggaaggaactgaagctgagagttacgggaaggatatggaaggaacaaaacccg
gatgctggggtctgcatacccaacctgtgtagctaa
DBGET
integrated database retrieval system
