Cucurbita moschata (crookneck pumpkin): 111449507
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Entry
111449507 CDS
T05248
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
KO
K03093
RNA polymerase sigma-I factor
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmos03021
]
111449507
Transcription machinery [BR:
cmos03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
111449507
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
Motif
Other DBs
NCBI-GeneID:
111449507
NCBI-ProteinID:
XP_022945188
UniProt:
A0A6J1G085
LinkDB
All DBs
Position
Unknown
AA seq
508 aa
AA seq
DB search
MGVVTVSSSAARSPLRLGAIFSNHNLSKRPSIVAFKVDKHTDTTLVSPHEQVILPVESNS
RNQKRSGKTSKSLKRVKAVFIDEATPCTLDVDYYEAAAKLENIFKLSSVTEDTDVECEDG
RPKRRQQRRKKPDKRPSDGIVRNHTRRIKRLDLDKRIALKSNKEGKATPSLRKQKDTVSE
ADETDDLVRNYPASTDMASLDWKKMKIPPVLSSSEHTRLFKLVQPMKELIQVQEELQKEL
GREPTEGELVDATNMNVIQVRRQLEVGRAARNNLIKHNLRLVLFVINKYFEDFASGPKFQ
DLCQAGVKGLMTAIDRFEPKRRFRLSTYALFWIRHAIIRSITLSSFTRVSFGLDSVRVDI
QRAKLELSCEHHRLPTEEEIIAKVGISPERYLEVMRAIKPVYSLHSRHSTTSEEFINAIT
DVESTGGDNQRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISR
EMVRKHEVKALMKLKHPARVDYLRRHLI
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgaccgtttcaagctctgcagcacgatctcctcttcggctgggtgcaata
ttctccaatcacaatttgtcgaaaagaccatcgattgtcgcttttaaagtggataagcac
actgacactactctggtctcacctcacgagcaagtgatcctgcctgtggagagtaatagc
agaaaccagaaaagatcaggaaaaacaagcaaatctttgaagagagttaaagctgtcttt
attgatgaagctactccctgcactttggatgtggattactatgaggctgctgctaaactt
gaaaacatattcaagcttagctctgtgacagaggataccgatgtggaatgtgaagatggc
agaccgaaaagacgccagcaaaggaggaaaaaaccagacaagagaccaagtgatggcata
gtcaggaaccatactaggaggattaagcgactagatctagacaagaggatagcattgaaa
agtaacaaggagggcaaagcaactccttcattaaggaaacaaaaagataccgtaagtgaa
gctgatgaaactgatgatcttgttagaaactaccctgcgtcaactgatatggcaagtttg
gactggaaaaaaatgaagattcctcctgttcttagttcatcagagcatacccgtttgttc
aagttggttcaaccaatgaaggaacttattcaagtacaagaagagctgcagaaagagttg
ggaagagaaccaactgaaggagaattggtcgatgcaacaaatatgaatgtaattcaagtg
aggaggcaactggaggttggtcgtgctgccagaaacaatctcatcaagcataatctccgc
cttgtactgtttgtgatcaacaaatactttgaagattttgcaagtggcccaaaatttcaa
gacctttgtcaagcaggtgtcaagggactcatgacagcaatcgaccgctttgagccaaag
aggagattccggctatcaacttatgctttattttggataagacatgctattattcggtcg
ataactctctcaagcttcacacgtgtctcatttggactcgactcggtaagagttgatatt
caaagagctaaacttgagttatcatgtgagcatcatagattaccaacagaggaagagatt
attgcaaaagttggcatctcgcctgagaggtacctagaagtaatgagggctataaaacca
gtttactctctccattctaggcactcgactacatcagaagagtttatcaatgcgatcact
gatgtagaaagtactggaggtgacaaccagcggcaaccagctcttctgaggcttgctctt
gacgatgtgcttgattctcttaagccaaaggagagcttggtgatcagacaaagatacggt
ctcgacgggaaaggaaaccgaacattaggtgagatagcaggaaatctaaatatttcaaga
gagatggtgcggaagcacgaagttaaagctctgatgaagctcaaacatcctgcaagagtg
gattaccttcgtcggcatttaatctga
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