Cucurbita moschata (crookneck pumpkin): 111449587
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Entry
111449587 CDS
T05248
Name
(RefSeq) ubiquitin receptor RAD23d-like isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03420
Nucleotide excision repair
cmos04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111449587
09124 Replication and repair
03420 Nucleotide excision repair
111449587
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
cmos03051
]
111449587
03400 DNA repair and recombination proteins [BR:
cmos03400
]
111449587
Proteasome [BR:
cmos03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
111449587
DNA repair and recombination proteins [BR:
cmos03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
111449587
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
UBA_7
CUE
Dsc3_N
Rad60-SLD_2
TECR_N
NQRA_N
Motif
Other DBs
NCBI-GeneID:
111449587
NCBI-ProteinID:
XP_022945311
UniProt:
A0A6J1G0H9
LinkDB
All DBs
Position
Unknown
AA seq
412 aa
AA seq
DB search
MKIFVKTLKGSHFEIEVQPQDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD
ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA
PPATITTSSLPAPAPAQAPAPAPAQAPAPAPAQAPATTVLPESDVYSQAASNLVAGSNLE
ETIQQILLMGGGIWDRDTVVQALRAAYNNPERAVDYLYSGIPEQVEVPPAAHVPSTVPVT
NPSAQPAQPAQPASATTTGPNANPLDLFPQGVPNLASGAVSSGSLDFLRNSPQFQALRAM
VRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQLADAMPQAIT
VTPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgaagattttcgtcaagactctcaagggctcacacttcgaaatcgaagttcagcctcaa
gatatggttgctgatgtgaagaaaaacatagaaactgttcagggtgctgacgtttaccct
gctgcacaacagatgcttatccatcagggaaaagttcttaaagacggcacaacactggat
gaaaataaagttgcagaaaatagttttattgtaatcatgttgacaaagaataaaagttca
tcgggtgggacgtcttctaccacacaagctgcaccagtgtcaaaggcaccacagaacact
gcccctgcacctgctgcaactccagtctcaacatctgaagttcctctaccaacttcagca
cctccggctactattaccacctcttctcttccagctccagcgccagctcaggcgccagct
ccagcgccagctcaggcgccagctccagcgccagctcaggcgccggcaaccactgtcttg
ccagaatctgatgtctacagccaagcagcttctaacctggttgcgggcagtaacttggag
gagactatccaacagattcttctcatgggcggagggatttgggatagggacactgttgtt
caagctcttcgtgctgcttacaataatccagaaagggctgttgattacctttattctggc
atacctgaacaagttgaagttccacctgctgctcatgttccgtctactgttccagtgacc
aacccttccgctcaacctgcacagcctgcccaacctgcgtctgcgacaaccactggtcca
aatgctaatccattagatctctttcctcagggtgtacctaatttagcttccggagccgtt
agttccggcagtcttgattttctacgaaatagtcctcagttccaagctttgcgagctatg
gtgcgggctaaccctcagatactccagcctatgcttcaagagttgggtaaacaaaatcct
cagcttattagacttattcaagatcatcaacctgacttcctccgcttgattaatgagcct
cttgaaggagaagggaatgtacttgggcagcttgctgatgctatgccgcaggctataact
gtaaccccagaggaacgggaagccattcaacggcttgaggatttgggtttcgacagagct
ctagtggtggaggttttcttcgcctgcaacaagaacgaggaaatggctgcgaactacctt
ttagatcatattcacgaatttgagggtaatcagaattaa
DBGET
integrated database retrieval system
