Cucurbita moschata (crookneck pumpkin): 111449606
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Entry
111449606 CDS
T05248
Name
(RefSeq) chaperonin 60 subunit beta 4, chloroplastic-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111449606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmos03019
]
111449606
03110 Chaperones and folding catalysts [BR:
cmos03110
]
111449606
03029 Mitochondrial biogenesis [BR:
cmos03029
]
111449606
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmos04147
]
111449606
Enzymes [BR:
cmos01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
111449606
Messenger RNA biogenesis [BR:
cmos03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
111449606
Chaperones and folding catalysts [BR:
cmos03110
]
Heat shock proteins
HSP60 / Chaperonin
111449606
Mitochondrial biogenesis [BR:
cmos03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
111449606
Exosome [BR:
cmos04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111449606
Exosomal proteins of other body fluids (saliva and urine)
111449606
Exosomal proteins of breast cancer cells
111449606
Exosomal proteins of colorectal cancer cells
111449606
Exosomal proteins of bladder cancer cells
111449606
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
111449606
NCBI-ProteinID:
XP_022945344
UniProt:
A0A6J1G0R7
LinkDB
All DBs
Position
Unknown
AA seq
588 aa
AA seq
DB search
MASSPTPISPLSFPNRRSKPKPNKPPPSLPPPWKPSPKSMPKEIYFNRDGSALKKLQVGV
DLVAELVGVTLGPKGRNVVLQRKYGPPKIVNDGETVLKEIELEDRLENVGVKLVRQAGAK
TNDLAGDGSTTSVVLAQGLIAEGMKVISSGMSPVQIARGIEKTANALVSELKLMSREVED
HEIAHVAAVSAGNDYAVGNMISDALRQVGRKGVVQIEKGKSIDNSLQIVEGMQFDSGYLS
PYFVTDRQKMIVEFHDCKLLLVDKKISDPKEMFKILDSAVKEKYPIVILAEGIEQAALAP
VIRNKLRGVLKAAAVKAPAFGERKSHYLDDIATLTGATVIREDSGLTLEKTGKEVLGSAT
KVVITKDSTLIVTDGTTREAVQKRVLQIQKLLENTEEKFPKKILNERIARLSGRIAILQV
GAQTQVELKDKQLRIEDALNASKAAIEEGVVVGGGCCLLRLSTKVDAIKNVLENEEQMIG
AEIFKRALSYPTRLIARNAGVNGSVVIDKVLINNDMNFGYNAATDHYEDLMKAGIMDPSK
VVRCCLEHAASVAKTFLTSDAVVVDIKEPESFPRRTPLPISGIKRMGL
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttcccccactcccatctctccactatcttttcccaatcggagatcaaaacca
aaaccaaacaaaccgcctccttcattgcctccgccgtggaaacccagccccaaatctatg
cccaaggagatttactttaaccgcgatggctctgccttgaaaaagcttcaggtcggtgtt
gatttggtggcggagttggtcggtgttacgttagggccgaaggggaggaatgtggtgctt
caaagaaaatatggtccgcctaagatcgtcaacgacggggaaactgtcctcaaagagatt
gaattggaagaccgtttagagaacgttggggtgaaattggtaagacaagctggtgcaaag
acaaatgaccttgctggtgatggttccactacatctgttgttcttgcccagggattaatt
gctgagggtatgaaggttatttcatctggcatgagtcctgttcaaattgcacgtgggatt
gagaagactgcaaatgcactagtttctgagctgaaattgatgtcaagagaggttgaagat
catgagatagcacatgttgctgcagttagtgcagggaatgattatgctgtgggaaatatg
atttcagatgccttacgtcaagttggaaggaaaggagtcgtccaaattgaaaaggggaag
agtatcgataacagtctgcaaattgttgaagggatgcaatttgattctggatatttgtct
ccgtactttgttactgatagacagaagatgatagtagaatttcatgattgcaagttactg
ttggtcgacaaaaaaatctcagatccaaaggagatgtttaaaatattggacagtgcagtg
aaggagaagtatccaattgtgatcttggcagagggcattgagcaggcagctttggctcca
gtaattaggaataaacttagaggtgtgctgaaggcagctgctgtcaaggctcctgccttc
ggcgaacgcaagagtcactacttagatgacatagcgaccctaactggagcaactgtgatc
agagaagatagtggactgactttagaaaagaccggcaaagaggtattgggctctgctact
aaggttgttataacgaaggattccacactaatagttacagatgggactactcgggaagca
gttcaaaaaagggttttacaaattcaaaagcttttggagaatactgaggaaaaatttcca
aagaagattttgaatgagagaattgctagactatctgggcgaattgctatacttcaggta
ggagcacaaactcaagttgaattgaaggataaacagttaaggattgaggatgccttgaat
gcgtcaaaggctgcaattgaagaaggtgttgtcgttggtggtggttgttgtcttttaagg
ctgtcaaccaaggtggatgctataaagaatgtcctggaaaatgaagagcagatgattggt
gccgaaattttcaaaagggctttgagttatcctacaagactaattgcgagaaacgccgga
gttaatggaagtgtggttatagataaggttctaattaacaatgatatgaattttggatat
aatgccgccacagaccattacgaggatttaatgaaagctggaatcatggatccatcgaag
gtcgtcagatgttgcttggagcatgccgcttctgttgcgaaaactttcctgacatccgat
gctgttgtagttgatatcaaggaaccagaatcctttccaagaagaacgccgttgcccatc
tcaggcatcaaacgaatgggtctttag
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