Cucurbita moschata (crookneck pumpkin): 111449622
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Entry
111449622 CDS
T05248
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111449622
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cmos01009
]
111449622
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmos03019
]
111449622
03036 Chromosome and associated proteins [BR:
cmos03036
]
111449622
Protein phosphatases and associated proteins [BR:
cmos01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
111449622
Messenger RNA biogenesis [BR:
cmos03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
111449622
Chromosome and associated proteins [BR:
cmos03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
111449622
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
Vac14_Fab1_bd
Htt_N-HEAT_1
HEAT_EF3_N
PDS5
HEAT_EZ
Adaptin_N
TOR1L1_N
Cnd1
TAF6_C
CLASP_N
TPR_TNPO3_IPO13_3rd
Motif
Other DBs
NCBI-GeneID:
111449622
NCBI-ProteinID:
XP_022945367
UniProt:
A0A6J1G0Q5
LinkDB
All DBs
Position
Unknown
AA seq
587 aa
AA seq
DB search
MSMVHEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGSQMRES
DLVDWFIPLVKRLAAGEWFTARVSACGLFHIAYPSAPEMLKTELRSMYGQLCQDDMPMVR
RSAATNLGKFAATIEPAHLKTDTMTIFEDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVS
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRTDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILSPELAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLQDKVYSIRDAAANNLKRLAEEFGPEWAMQHIVPQV
LDMINNPHYLYRMTVLRAVSLLAPVMGSEITCTKLLPVVISSSKDRVPNIKFNVAKVLQS
LIPIVDQPVVEKTIRPSLVELSEDPDVDVRFFANQALQSIDHVMMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtctatggtccacgagcctctatatccaatagctgtccttattgacgagctgaaaaat
gatgacattcagctacggttgaactcaattcgtagactttctacaattgcacgtgctctt
ggagaggagcgaacgcgtaaagaattgatcccatttctgagtgaaaacaatgatgatgat
gatgaggtgcttcttgctatggctgaggagttgggagtgttcatcccatatgttggtggt
gttgagcatgcccatgttttgcttccacctctggaaactctgtgcactgttgaggaaacc
tgtgtgagggacaaagctgtggagtctttgtgcagaattggttcccaaatgagagagagt
gatttagttgattggtttattcctctcgttaagagattggcggctggtgaatggtttacg
gctagagtatccgcatgtgggctatttcatattgcctaccctagtgctccagagatgttg
aagactgagttgcggtcaatgtatggccaattgtgtcaagatgatatgcccatggttagg
aggtctgctgcaacaaatctaggaaagtttgctgcaacaattgaacctgctcatctgaag
actgataccatgactatttttgaggatcttactcaagatgatcaggactctgtgagattg
ctggccgttgagggttgtgcagctttgggcaagttattggaaccccaggattgtgtatca
catattcttccagttatcgttaacttctcccaggataagtcttggcgtgtccgttacatg
gttgccaaccagttatacgagttgtgtgaagctgtaggacctgaacctactaggacggac
ttggtacctgcttatgtgcgcttgcttcgagacaatgaagctgaagttcgtatagcagct
gctggcaaagtgaccaagttttgccggattttaagtccagaactagcaattcagcatatc
cttccctgcgttaaggaattgtcatcagattcctctcagcatgtccgttcagctttagcc
tcagttatcatgggaatggctcctgtgttgggaaaggatgctaccatcgaacaactgctt
ccgatattcctttctctgcttaaggatgaattccctgatgtgcgcctcaatatcattagc
aagcttgatcaagtaaatcaggttattggaattgatctcttgtctcaatcactgttacct
gccattgttgaacttgctgaggatagacactggagagttaggttagcaattatagaatac
attcctttattggcaagtcagctgggtgtagggttttttgacgataagcttggtgctctt
tgcatgcagtggttacaggataaggtttactcaatccgtgatgcagctgctaacaatttg
aagcgccttgcagaagaatttggtcctgagtgggcaatgcagcatattgtcccacaggtt
cttgacatgattaacaacccacattatttgtatcgaatgactgttcttcgtgcggtctcc
cttcttgccccagttatgggctcagaaatcacatgcacaaagcttttaccggtggttatc
agttcttccaaggacagggttccaaatatcaagtttaatgtggcgaaagtgttgcagtct
ctcattcccatagttgaccaacctgtggtggaaaaaactatccgccctagcctagttgaa
ctcagtgaagatccagatgtagatgtccggttctttgctaaccaagctcttcaatcaatc
gatcacgtgatgatgtccagttag
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integrated database retrieval system
