Cucurbita moschata (crookneck pumpkin): 111449657
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Entry
111449657 CDS
T05248
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111449657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmos03041
]
111449657
Spliceosome [BR:
cmos03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
111449657
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
111449657
NCBI-ProteinID:
XP_022945419
UniProt:
A0A6J1G0W2
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All DBs
Position
Unknown
AA seq
484 aa
AA seq
DB search
MATLADSFLADLDELSDEDNFPDEEDVDAENMEEDIDGDLADLESLNYDDLDNVSKLQKS
QRYSDIMQKVEDALQKDSNISNQGLVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK
YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL
PEEILQKTIDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLG
SLAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLVSAKS
TLAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL
RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK
VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGGGTQSTYFSETGTFSK
IRKN
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggctacattggccgattcttttctagcagatcttgatgaactctctgatgaagacaat
tttccggatgaggaagatgttgacgctgaaaatatggaagaggatattgatggagacctt
gccgacctagaaagccttaattatgatgatcttgataatgtctcaaaattgcagaaatca
cagagatacagtgatataatgcagaaagtggaagatgcactgcagaaggattctaatatt
tcaaatcaaggattagtattggaagatgatcctgagtaccaactgattgtggagtgtaat
gctttgtcggtggatattgagaatgaaattattattattcacaattttatacgtgataaa
tatcgattgaaatttccagagcttgaatcacttgtgcaccacccaattgattatgctcga
gttgttaagaagattggcaatgaaatggatttgactcttgtagacttagaagggctttta
ccctctgctgtcattatggttgtctcagttacagcatctaccacaagtggcaagccactt
ccagaggaaattctccagaaaacaattgatgcatgtgaccgggctcttgctttagattca
gcaaagaaaatggttcttaactttgttgaaagtagaatggggtatattgcaccaaatctt
tcagccatagttggaagtgctgttgcagcaaaactaatgggaactgctggtggtcttggt
tctttagctaagatgcctgcttgcaatgtccagcttcttggtgcgaagaaaaagaacctt
gctgggttttccacagcaacttcacagtttcgggtaggttacattgagcaaacagagata
ttccaatcaacacctccccctttgaagatgcgtgcttgtcgacttgtatctgcaaaatca
acacttgcagcacgggttgactccaccaggggcgatcctactgggaagactggaagagtt
tttaaagatgagatccttaagaaaattgagaagtggcaagaacctccaccagctaaacaa
ccaaaacctcttccggtccctgattctgaaccgaaaaagaagagaggtggccgtcgacta
aggaagatgaaggaaagatatgcaacaacagagatgaggaagctagccaacaggatgcag
tttggggtgcctgaagagagttctttaggagatggattaggggaagggtatggaatgctt
ggtcaggctgggagtggcaagctgcgtgtgtcagctgctcagagcaagcttgccgcaaaa
gttgttaagaagttcaaggaaaaacgttatggaagcagtggtgctacgtccggcctgacg
tccagtttagcatttacacctgtacaagggattgagctgtcgaatcctcaggctcatttg
aatcaattaggcggtggaactcaaagtacctacttttctgaaacgggaacattttcaaag
atcaggaaaaactaa
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