Cucurbita moschata (crookneck pumpkin): 111449983
Help
Entry
111449983 CDS
T05248
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos00040
Pentose and glucuronate interconversions
cmos01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111449983
Enzymes [BR:
cmos01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
111449983
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
111449983
NCBI-ProteinID:
XP_022945874
UniProt:
A0A6J1G261
LinkDB
All DBs
Position
Unknown
AA seq
502 aa
AA seq
DB search
MFPVLSILLIWMSGLFFLVASASFNLTLPHQHPDPDSVADELQRTVNASISRRKALSIES
KDQAFSCLTGNPIDDCWRCDPNWAANRQRLADCGIGFGRDAMGGKGGKIYIVTDSSDSNP
ENPTPGTLRHAVIQFEPLWIIFSADMTIKLKYELIINNFKTIDGRGANVHITGGGCITIQ
YVSNIIIHNIHVHHCVPSGNANIRSTPTHVGHRGLSDGDGISIFSSRKIWIDHCSLSYCT
DGLIDAIMGSTGITISNSYFSHHDEVMLLGHDDRYVQDSGMQVTIAFNHFGEALVQRMPR
CRHGYIHVVNNDFTAWEMYAIGGSARPTINSQGNRYVAPVNPNAKEVTRRLDAAETEWTA
WNWRTDGDILVNGAFFVPSGAGLSTQYGKASSTEPKSVALINQLTMNAGVLGAPRYSNGE
GIVYPGFSGSTGGGNGGYGGGTVINNSPMYGNSGGGEDDFYGMIFKGGGNRVSPPWSPPM
ILCVQILVVLYVVTNNSGLLTL
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgtttcctgttcttagcattctcttgatatggatgtctggtttgttctttcttgtcgct
tcggcttctttcaatctcacattgccccaccagcatcctgaccctgattctgttgctgat
gaacttcaaaggacagtcaatgcatcgatatcgagaagaaaagcgctatccatcgaatca
aaggatcaagccttctcttgcctcaccggaaaccccatagacgattgctggcgttgcgac
ccgaattgggcggcgaaccggcagagactcgctgactgcggcatcgggttcggccgcgac
gccatgggtggcaaaggcggcaagatctacatcgtcaccgactcctcagattccaacccg
gaaaacccaactccgggaaccctccgccacgccgtgatccaattcgaaccactctggatc
atcttctccgccgacatgacaatcaaactcaaatatgaacttatcatcaacaacttcaaa
acgatcgacggccgtggcgccaacgtccacatcaccggcggtggttgtatcactatccaa
tacgtgtccaacatcatcatccacaacatccacgtgcatcactgtgtaccctctggcaat
gccaacataaggtcaaccccgacccacgtcgggcaccgagggctatcagacggggacggg
atctcaatattcagctcaagaaagatttggatagaccattgctcgctttcatactgcacc
gacgggctaatagacgcaataatgggatcgacagggataacaatatcgaacagctatttt
tcgcaccacgacgaggtgatgctgctgggacatgacgaccggtacgtgcaggactcgggt
atgcaagtaaccatagcattcaaccacttcggtgaggctctggtgcagcgcatgcccagg
tgcagacatggctacattcatgtggtcaacaatgacttcacggcttgggaaatgtacgcc
attggcggcagtgctcgccccactattaacagccagggtaaccgttatgtggctcctgtc
aaccccaatgccaaagaggtgacgagacgtttagatgcggcggagacggaatggacggcg
tggaattggcggacggacggcgatattttggtgaacggcgcgttttttgtgccgtccggt
gccggacttagcacccagtacggtaaagcctccagtactgagcctaagtcggtggctctt
attaatcagctcactatgaacgctggcgttttgggtgccccaaggtatagtaatggtgaa
gggattgtatatccaggatttagcggcagcactggcggcggtaatggcggatatggcggc
ggcactgtcattaataatagcccgatgtatggaaatagcggtggtggagaggatgacttt
tacggaatgatatttaaaggcggcggtaacagagtatcgccgccgtggtcgccgccgatg
atcttatgtgtgcaaattttagtagttttgtatgtagtaacaaataatagtggtttattg
acgttatag
DBGET
integrated database retrieval system