Cucurbita moschata (crookneck pumpkin): 111450013
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Entry
111450013 CDS
T05248
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos00040
Pentose and glucuronate interconversions
cmos01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111450013
Enzymes [BR:
cmos01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
111450013
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
111450013
NCBI-ProteinID:
XP_022945913
UniProt:
A0A6J1G2B9
LinkDB
All DBs
Position
Unknown
AA seq
447 aa
AA seq
DB search
MEMAESGGWIRLFLLVVFMLFVETIARAPKEIHEIENRATEILRSSSNASMAERLEDVEA
LGNKHAVDNPEEVAAAVDMSIRNATARRELGFFSCGTGNPIDDCWRCDPNWQQNRKRLAD
CGIGFGRNAIGGRDGRYYVVTDSGNDNPVSPRPGTLRHAVIQDEPLWIVFKRDMVIQLKQ
ELIMNSFKTIDARGTNVHIANGACITIQFVTNVIVHGLNIHDCKPTGNAMVRSSPNHVGW
RTMADGDAISIFGSSHIWIDHNSLSNCADGLVDAVMGSTAITITNNYFTHHNEVMLLGHS
DSYVRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQ
GNRYAAPTNPFAKEVTKRVETAESEWKNWNWRSEGDLLMNGAFFTPSGAGASASYARASS
LGAKSSSMVASITANAGALNCRRGHAC
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggcggaatctggaggatggattcggttgtttcttctcgtggtgttcatgttg
ttcgtcgaaacaattgccagagctcccaaagagattcatgaaattgagaatcgagcaacc
gagatattgcggagctcaagcaatgcatcaatggcagagaggttggaggatgtcgaggct
ttaggtaataagcatgccgtggacaaccctgaagaggtcgctgctgcggttgacatgagc
attcgcaatgccactgcaaggagggagcttggattcttctcgtgtggaaccggcaatccc
attgatgattgctggcgttgtgaccccaattggcaacagaaccgcaaacgtcttgcagat
tgtggcattggctttggccgaaatgccatcggtggtcgcgacggtcgatactacgtcgtc
actgattccggcaacgacaaccctgtcagtccaaggcctggcactttacgacatgccgtc
atccaagatgaacctctctggattgtgttcaaaagagacatggtgatacagctgaaacag
gaactgatcatgaacagtttcaagacaattgacgctcgtggaaccaatgttcacattgct
aatggtgcttgcatcaccatccagtttgtgactaatgttattgtccatggtctaaatatc
catgactgcaagcccactggaaacgccatggtaaggagctcacccaatcacgttgggtgg
agaacaatggctgatggagatgccatttccatttttgggtcaagtcatatttggatcgat
cataattcactctctaactgtgctgatggccttgttgatgctgtcatgggatccactgca
attacaatcaccaacaattacttcacccaccacaatgaggtaatgttattgggacatagt
gattcatacgttagggataaacaaatgcaagtgaccattgcttacaatcactttggagaa
ggactcatccaaagaatgccaaggtgtagacatggatacttccatgtggtgaacaatgat
tatactcactgggagatgtacgccattgggggtagtgcaaatcctactatcaatagccag
ggtaacagatatgctgcaccaaccaacccttttgcaaaagaggttaccaagagggttgag
acagctgaatctgagtggaaaaactggaattggagatcagagggagacctattgatgaat
ggtgcctttttcactccatctggtgcaggggcctcggcaagctatgctagagcctctagt
ttgggagctaaatcctcatccatggttgcttccataacagccaacgccggtgcacttaac
tgccgacgaggtcacgcctgctag
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