Cucurbita moschata (crookneck pumpkin): 111450354
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Entry
111450354 CDS
T05248
Name
(RefSeq) replication factor C subunit 3-like
KO
K10756
replication factor C subunit 3/5
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03030
DNA replication
cmos03410
Base excision repair
cmos03420
Nucleotide excision repair
cmos03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111450354
03410 Base excision repair
111450354
03420 Nucleotide excision repair
111450354
03430 Mismatch repair
111450354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmos03032
]
111450354
03036 Chromosome and associated proteins [BR:
cmos03036
]
111450354
03400 DNA repair and recombination proteins [BR:
cmos03400
]
111450354
DNA replication proteins [BR:
cmos03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
111450354
DNA Replication Termination Factors
ELG1-RFC complex
111450354
Chromosome and associated proteins [BR:
cmos03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
111450354
DNA repair and recombination proteins [BR:
cmos03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
111450354
Check point factors
HRAD17(Rad24)-RFC complex
111450354
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCF1-5-like_lid
RFC_C
RuvB_N
UBN_AB
nSTAND3
COMPASS-Shg1
AAA_22
Rad17
RsgA_GTPase
AAA
Motif
Other DBs
NCBI-GeneID:
111450354
NCBI-ProteinID:
XP_022946202
UniProt:
A0A6J1G337
LinkDB
All DBs
Position
Unknown
AA seq
598 aa
AA seq
DB search
MAATQQQPNSSSSSSLRRSLSDSNTRRRQRRRGSISTASSSSKSSWSTKLAKLLARLNLF
SRNSDLTEESLQAHNERIDDLDKTPLKSSPYYRGLTDSSLAINYHHGPLTTGPHHYASST
TTAQTQTSLSYAVVSKLKEWAPCLIGKPNTKPPAHQQYETPTTTTVVGKTTSLAVSSSPE
KIERWATEKEEKLLRERLVMYGRREGGSGVGVDGGGEAAEKERYTWGDKYRPKVLEDFIC
NRKTACELKKVVEEKGCGHYIFEGPPGVGKRTMIQAMLRQAFGEQAMEVKEVDRVFALKS
EMVGSIEVKVKESSHCVEVNLSQTKGFEKQVIDQLIKETQSPLPCNHARCRGILLCEADQ
LSNETLMYVKWAIERNKGCSKIFFCCSDVSKLLLLSSFCTHVHLSPPSKQEIVEVLEYIA
KQQEFDLSRRMAERIADNSKNNLRQAIRSLEASWKKSRLFEEDENKLLTGWEDDIADVAK
KIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIFKTLVDELKKFLDEELQHRVESFYADYNK
MEEKPFVTEKGNGEEAVIKELHDPMRKNVNHFLKIEEFIAKFMSCYKGEANKNNYLLT
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggctgccacacaacaacaacccaactcctcctcctcctcctctctccgccgctccttg
tcagactccaacacgcgccgccgccaacgccgccgtgggagcatctccacagcctcctcc
tcctcaaaatcgtcctggtccacaaagctagccaaactcttagcccgtctcaacctcttc
tcccggaactccgacttgacggaagaaagcctccaagcccataacgaacgaatcgacgac
ctcgataaaaccccccttaaatccagcccttattaccgcggcctcactgactcctccctc
gccatcaattaccaccatggcccactcaccactggtccccaccactacgccagctcaacc
accacggcccaaactcaaacctctctctcatacgccgtcgtttcaaaactcaaggagtgg
gccccatgtctcataggaaaacccaatacgaagccgccagctcatcaacaatacgaaact
ccaacgacgacaacagttgtgggtaaaacgacgtcgttggctgtttcgtcgtctccggag
aagattgagaggtgggcgacggagaaggaagagaagctgttgagggagagattagtaatg
tatgggcggagagagggagggagtggagtgggggtagacggcggaggagaggcggcggag
aaggagaggtacacgtggggggataaatacaggccaaaagtgctggaggattttatatgc
aatcggaaaacggcgtgtgagttgaagaaagtggtggaggagaagggatgtgggcattat
atattcgaagggccgccgggagttgggaaaaggacgatgattcaagccatgctcagacag
gctttcggagaacaagcaatggaggtcaaggaagttgatagagtttttgccttgaagagt
gaaatggtggggagcattgaagtaaaggtgaaggaatcatcccattgtgtggaagtcaat
ctctcacaaaccaaaggctttgagaaacaagtcattgaccagctcatcaaagaaactcaa
tcccctttgccatgtaatcatgccagatgtcgagggatattgttatgtgaagcagatcag
ctatcaaatgaaaccctaatgtacgtaaaatgggcaattgagaggaacaaagggtgcagc
aaaatcttcttctgttgctctgatgtctctaagcttcttcttcttagctctttctgcact
cacgttcatctctccccaccttcaaagcaagagatagtggaagttctggaatacatagca
aaacaacaagaattcgacttgtcgcgtcgaatggcagagagaatcgccgacaattccaag
aacaacctccgacaagccattcgatccttggaggcttcgtggaaaaaaagtcgcttgttt
gaagaagatgagaataaattattgacgggttgggaagatgatattgctgatgttgctaag
aagatcgtcgaggagcaaagcccaaaacagctgtatattgttcgtggaaagctaaaaaag
cttattgaatacgatgtctcccccaatttcatttttaagactctagtagatgaattaaag
aagttcttggacgaagaattacagcatcgagtcgaaagtttctatgccgattataacaaa
atggaggaaaaaccatttgtcactgaaaaaggcaatggggaagaagccgtgatcaaagag
ctgcatgatcctatgagaaagaacgttaaccacttcttgaagattgaagaattcatagcg
aagttcatgagctgctacaagggagaagcaaataagaacaattatttgctgacatga
DBGET
integrated database retrieval system
