Cucurbita moschata (crookneck pumpkin): 111450356
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Entry
111450356 CDS
T05248
Name
(RefSeq) DNA polymerase zeta catalytic subunit
KO
K02350
DNA polymerase zeta [EC:
2.7.7.7
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
111450356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmos03400
]
111450356
Enzymes [BR:
cmos01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
111450356
DNA repair and recombination proteins [BR:
cmos03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
B-family DNA polymerases
111450356
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
POL3_N
REV3_N
DNA_pol_B_exo1
zf-C4pol
Zn_ribbon_RanBP
Zn_ribbon_TEX13
Motif
Other DBs
NCBI-GeneID:
111450356
NCBI-ProteinID:
XP_022946200
UniProt:
A0A6J1G355
LinkDB
All DBs
Position
Unknown
AA seq
2784 aa
AA seq
DB search
MGDAQSESSIFSVRIVSIDYYLAPPIPGLGVSYSRFQGGKVNVVPVLRIYGSTPAGQKTC
VHVHGVLPYLYVPCSEISLQLQGKGEAFANDVSLALEKALKLKGNSSSKRQHVHGYNLVR
AKKLYGYHSSEELFMKIYLYHPQDITRAANLLLNGAILEKILQPYESHIPFVLQFLVDYN
LYGMGLLHLMKLKFRHPVPDAPGKKLNHILQYVSENHGMDNPTCMPSDSEADPSNDAAST
SPVWISSKIPTDWMWKSPTAMDALDDGGINLCKRQSVCELEGDAAVEDILNQHSKLYTSF
SQTHSDVKMVQSLVSIWEEEHRRTGLQEAPVPPDPGKPLSKEVLETFSIGMDYEKKMTEL
YERPKCPSVLTPLEKDERLVQSLTSSANEANIIGLGCSDGEPLKHVMEIGRTNLDSFYPN
SLEDHDKMLIEGDDMVPRLSMDEVEVTPKVVDEEALGLLRWLATSQAAQDINSDDELLCE
TILGPLLPAANMDQVLERASQDYGSESQKECQDILDSVEDLDEFEGFNKRKCCPDDEHLS
RSSSEETIPQLDGAADDMFTPCGGSTENSPDRDLYIENERSSKLVVLHGIDSDTCSHKKE
KSLWDSLPFQEAEKVNTDSTCVNSCRPDICASLTRDSGFISCFSKEEGGQRDVTVEIEGT
GTYTSREGNAFVECSVRDLMRRKRHYRNEQLDCGNGKAKNFTVGSRQKKVWSRGLDSQVL
QTNEHNLRFQDSSHLMPCLTNQITSSDIFYENKSTYSDSSMYGKLPLVDGCDGLVQASSP
NVGEIPGSETVAGPSQMCFDPWLSESETLGLGSVPLGGCQTLASKNKSDADVHESMPSMQ
CAYEDYLAPCTKRRFLLVNQNSNDRKQKEDAVLSGLGHSLSLVADFDREKILSIGMTTRI
KPPNAELMHKEPINTSNTSILSRKLAPLDKKDPEERTGRALDDLLPFFLPRDKKDIFEDY
DSSSLKEVVMGVPIHYRNDGSFMYILTHVKSPPSTDSVRQWLSSEQRALRINSGKPFVDD
PDKPLPQPGSSSHTSHIVNHGGLTNSSADETSFHENVEPVKSGGVTAKVKACASFSQDIS
QISGPDEISKDTPLSQIGFCDPASVGGVQQLTLLSVEVQAECRGDLRPDPRLDAVKMIAL
AIQNDSGPAVDVVLILCTNIGSSKRNRDGIDYKVLVHHEERSLFQSFMKIIYLSDPDILI
GWDIQSSSLGYLAERASQLGISLLNKISRTPDETEILDGDSNTHTEIPENLVSELVNSDS
AAVEDMIIEDEWGRTHASGIHIGGRIVLNIWRLMRNEVKLNMYTLEAVTEAVLKRKFPYI
HHRVLTQWFNSGPQKARFRCIEYVMERAKLNLQLMNQLDMINRTSELARVFGIEFFSVLS
RGSQHRVESMLLRLAHSQNYLAVSPGNLQVASQPAMECLPLVMEPESGFYDDPVVVLDFQ
SLYPSMIIAYNLCFCTCLGKVAPSKVNTLGVISYSPERQVLEELKDQILLTPNGVMYAPP
KVCKGILPRLLEEILSTRIMVKQAMKKLAPSQKVLQRVFNARQLALKLIANVTYGYTAAG
FSGRMPCAELADSIVQCGRRTLENAISFVNLQEKWKAKVIYGDTDSMFVLLKGRTVEQAL
GIGQEIASAITAMNPNPVTLKMEKVYAPCFLLTKKRYVGYSFESPEQIEPAFDAKGIETV
RRDTCAAVAKTMEQSLRLFFEHQDISEIKRYLQRQWKRILSGRVSIQDFVFAKEIRLGTY
RTRGPSSLPPAAIVATKAMRIDPRAEPRYGERVPYVVIYREPGARLADMVVDPMDLLAVD
SPYRLNCLYYINKQIIPALQRVFGLVGANLNQWFLEMPRPVREVFFKQPLSAANPNRTRI
DYYYLSKHCILCGELVQTSSNLCNQCLQNEAAATTAIIRKTSKLESEMQHLAAICQHCGG
ADGIVEPGVKCTSLACSVFYERLKVQKEFRGLAAVAAHRDLYPKWTSLSSTMAQSPFSLL
FLKRLSFSSRFSNAPLSSPLLSHFLTIGSSKRFFTSEVSSTPSSPSSNPKPNSLSARMSF
IFDQIDAIEKERSQKDQTLQRIRAWRESKANQNPPVEDGQPESTLGSGNLGDNVNNSESA
LRMDEENEVERTEKKRKEIELVHPWPEWIELMERLVHQNYFDHRRKDENKMVEELGFSAS
DLALEEDVGLDLSKDFKAVYTACLNFGKDRFDILRSLSRKDIQILVGFGCPSPDKKVVFS
AKLLRKLVHLDEGDVCSSCSLRNSCERAYLVTNKEDEARTIDIMRLLFTFGFDHMNGTVV
NDSLLKRKTVKTVVRKLLHGVVKLGSVPIDPTLSPPVIKRPPPKVKQPPPPPKKRVGRDD
VEMKKGDWLCPKCDFMNFAKNMVCLQCDAKRPKRQLLPGEWECPECNFLNYRRNMACFHC
ECKRPTDTFLDNEKQERQHVPSRFEKVANRQEVSNAWNFDFDDDESDGADVAAFEYADSS
VAAEGSHADNLARGSKYNSDLPERQHSDAGNRGPGVGFDDFVDEEDDIDNYELDSSVNNS
GRQPHSVDFSDIEGHSGSEDGDDFGHRSGVPSYNKRPRRQQAAFSDSEGDELDSDDDISA
KKNWKSSHLTSSRQKSRDNGRSRRGLSYGSDENLDSDLDEDLDERPRSRRSEGKDFDSNR
KHFQTRGSSRMGGRSSESDFDDFDRGMRRQKLKGNQRENNRRGSDTRARGDKYSRGSEFQ
SNNFRNGRKNTFDDDFDDFGDKSHRSRGTNSRFRGNSHGGRGTYSSGSPKEGYKKDRPRR
YNEYDTTTDKDYGDFKNSRRVIER
NT seq
8355 nt
NT seq
+upstream
nt +downstream
nt
atgggggatgcgcaatcagaatcgagtatcttcagtgttcggatcgtctccatcgattac
taccttgcgcctccaattccaggcctcggcgtatcctacagtcgctttcaaggcgggaag
gtgaacgtggttcctgtattgagaatatatggttcgactccggctggtcagaaaacatgc
gtccatgttcatggagttttaccctatttatatgtgccgtgctcagagatttcattgcag
ttgcaaggcaaaggagaagcttttgcgaacgatgtgtcacttgcacttgaaaaagcctta
aagctgaaaggcaattctagttctaagagacagcatgtacatggttataatcttgttcga
gcgaagaagctttatggttaccactcatcagaggagctttttatgaagatatatttatat
catccacaagatatcacccgtgctgcaaatcttctgctgaatggtgccattctcgaaaag
attttacagccttatgaatcgcacataccatttgtcctgcagttccttgttgactataat
ttatatggtatgggtcttctgcatctaatgaaattgaagttccgtcatccagtaccagat
gctccagggaaaaaattaaatcacattttacagtacgtgagtgagaatcatggaatggac
aatccaacttgcatgccttctgattccgaggcagatccaagtaatgatgcagcatcaact
tcaccagtatggatatcttctaaaattccaacagattggatgtggaaatctcctactgca
atggatgcattggatgacggtggaatcaatctctgtaaacgtcaaagtgtttgtgaactt
gagggagatgctgccgtagaagatattctcaatcaacattctaaactatatacgtctttt
tctcaaacccattcagatgtgaaaatggttcaatcgcttgtatcgatttgggaggaggaa
catagaagaacggggctgcaggaggcaccagtgccacctgatcctggaaaaccattgtca
aaagaagttttggagactttctcaattggtatggactatgagaaaaaaatgactgaatta
tatgagagaccaaaatgtccatcagtgttaactccacttgaaaaagatgaaaggttggtg
cagtcattgacatcttcagctaatgaagcaaatataattggactaggatgttctgatggt
gagcctttgaaacacgttatggagatcggcagaactaatttggactcattttacccaaat
tcattagaagatcatgacaaaatgctgattgaaggagatgatatggttccgagattgtct
atggatgaagttgaagtaactcccaaggttgtcgacgaggaggcactaggcctcctgaga
tggctagctacttctcaggctgcacaagatattaattccgacgatgaacttctttgtgag
acaattttggggcccttgttgcctgcagcaaacatggatcaagtgctagagagagctagc
caggattatggttctgagtctcaaaaggagtgtcaagacattctcgattcagttgaagat
ctagatgaatttgagggatttaacaagagaaaatgttgtcccgatgatgagcatctttcc
aggtcttcttctgaagaaactattccccaacttgatggtgctgcagatgatatgttcact
ccttgtggagggtcgactgaaaactcacctgatagagatttatatattgagaatgaaaga
tcttccaaacttgtggtgttgcatggcattgattcagatacttgcagccataaaaaggaa
aaatcattatgggactctttaccttttcaggaggctgagaaagtgaatacagattcaaca
tgtgtcaattcttgcaggcctgatatatgtgcaagtttgactagagattctgggttcatc
agttgcttttctaaagaagagggaggacagagggatgttacagtagaaattgaaggcacg
ggtacatatacctccagggaaggcaatgcctttgtagaatgttctgtccgtgatttgatg
aggaggaagcgtcactatcgaaatgagcaacttgactgtggaaatggtaaagctaaaaat
tttactgttggtagtaggcaaaaaaaagtgtggtcaagaggcttggattctcaagtgttg
caaaccaatgaacataacttgagatttcaggactcttcccatttgatgccatgtttaact
aatcaaattactagttctgacatattttatgagaataagtctacttattctgatagttcc
atgtatggtaaactgccgcttgtagatggctgtgatggcttagtgcaggctagttcacca
aatgttggagaaatccctggatctgagacagttgcaggtcctagtcaaatgtgctttgat
ccgtggctttctgagtcagagaccctaggcctaggttctgttcctcttggtggttgtcaa
actttagctagcaagaataagagtgatgctgatgttcatgagagcatgccttccatgcaa
tgtgcgtacgaggattatttggctccatgtacaaaaagaagatttcttttggttaatcag
aatagtaatgatagaaaacagaaagaggatgctgttttgtctgggcttggccactctcta
tctctggttgccgattttgatcgtgagaaaatattatcaattggtatgactacccgcata
aagccaccgaatgcggagttgatgcacaaagaacctataaacacttctaatacgtctatc
ctgtcaaggaaacttgctcctttggataaaaaagatcccgaagagagaacaggaagagct
ttggatgatcttttgccattttttctacccagagacaaaaaagatatttttgaagactat
gactccagttctctgaaagaagttgtcatgggtgttcccattcactatcgaaatgatggc
tccttcatgtatattttaacacatgtaaagtcacctccttctacagatagtgttcgtcag
tggctatcaagtgaacagagagctctcaggatcaactcaggaaaacctttcgttgatgat
ccggacaagcctctgcctcaacctggttcttcatctcatacaagtcatatagtaaatcat
ggaggcctgactaactcatctgcggatgaaacctctttccatgaaaatgtagaaccagtc
aaaagtggaggagttacagcaaaagtaaaagcttgtgcgagtttttcacaagatatatct
caaatttctggcccagatgagatatcaaaagatactcctcttagccaaattgggttttgt
gatcctgcaagcgttggaggagtgcagcaattaacattgttgagcgttgaggttcaagca
gaatgtaggggtgatcttaggcctgatcctcgacttgatgccgtcaagatgatagctctt
gcaattcagaatgatagtggccctgctgtcgatgttgttttaattttgtgtactaacatt
ggttcgtctaagagaaatcgtgatgggattgactacaaagttttggttcatcatgaagag
aggtctttatttcaaagttttatgaaaattatatatttatccgacccagatattttgatt
ggctgggatattcaaagtagttctcttggatatttggcagagagagcttctcagcttggt
ataagtttactaaataagatatctaggacacccgatgaaaccgagatattggatggagat
tcaaatactcacactgaaattccagaaaacctggtttctgagttggtaaattctgattct
gctgcagtagaagatatgataattgaggatgaatggggtcgaacacatgccagtggaatc
catattggtggtaggattgttctaaatatatggaggcttatgcgcaatgaagttaagctt
aatatgtacacgcttgaagctgttacggaagctgttttgaaacgaaaatttccatacatc
catcatagagtattaacacaatggtttaacagtggtcctcaaaaagcaagattccggtgc
attgaatatgtgatggaaagagcaaagttgaaccttcaactaatgaatcagctcgatatg
ataaatagaacttcagaacttgctcgtgtgtttggcattgaatttttttctgttctatct
cgaggctcgcaacatcgtgtcgaatctatgttactaagattggcgcatagtcaaaactat
ctggcagtctcccctgggaatttgcaggtcgcttctcaacctgcaatggagtgcctacca
cttgtgatggaacctgagtctggtttttatgatgatcctgttgtagttttagatttccag
tctctttatccatccatgataattgcttacaacctatgcttttgtacgtgcttgggcaaa
gtagctccttcaaaggttaatacactaggagttatttcatattcaccagaacgacaggtt
cttgaggaactgaaagatcagatactgctaactcctaatggtgtgatgtacgcaccacca
aaggtttgtaaaggtatattgcctcgtcttctggaggagatattatcgactagaatcatg
gtgaaacaggcaatgaaaaagctggctccatcacagaaagttcttcagagggtgtttaat
gcaagacagcttgctttgaagctgatagcaaacgtaacatatggttatacagcagctggt
tttagtggtcgtatgccttgtgctgagcttgccgatagtattgttcagtgtggccgccgt
acactagaaaatgcaatctcatttgttaatttacaagagaaatggaaggctaaagttatt
tatggggatactgacagcatgtttgttcttctaaagggacgtacggttgaacaggctttg
ggcattggccaggaaattgcatctgcaatcactgcaatgaatcccaatccagttacactc
aagatggagaaagtttatgccccttgcttccttctcactaagaagcgctatgtgggctac
agttttgagagccctgaacaaattgaacccgcttttgatgctaaaggcattgaaactgta
cggagagatacttgtgcagctgtagcaaagacaatggagcagtcattgaggcttttcttt
gaacatcaggatatttcggagatcaaaagatatttgcagcgtcaatggaagcggattctt
tcaggaagggtttcaattcaagattttgtctttgcaaaggagatacggctaggtacatat
cgtactaggggtccatcctcacttccaccagcagcaattgtggccactaaggcaatgagg
attgatccaagggcagaaccgcgttatggagaacgagttccttatgttgtaatttatagg
gaacctggagctcgccttgccgatatggttgttgatccaatggaccttttagccgtggat
tccccctacagattgaactgtctatattacatcaacaaacaaataatacctgccctgcaa
agagtttttggtcttgttggagccaacttaaatcaatggtttttggagatgcctcgtcca
gtcagggaagtgttttttaaacaacccttatcagctgcgaatcctaatcggacccgaatt
gattattactacctatctaagcattgtatactatgtggcgagttagtccagacctcatct
aatttatgcaatcagtgtctacaaaatgaagctgcagctaccactgcgataatcagaaaa
acttcgaaattagagagtgaaatgcaacaccttgctgccatatgccaacattgtggagga
gcagacgggatcgtggaacctggtgtgaaatgtacttcactcgcgtgttcagttttctat
gagaggcttaaggttcagaaagaatttcgtggtcttgctgctgttgctgcacacagagac
ctgtatccaaaatggacatccctctcttcgaccatggcgcagtcccccttctctctcctc
ttcctcaagcgtctttccttctcttctcgattctccaatgcacctctttcttcgcccctc
ctttctcatttcctcactatcggatcatccaagcgatttttcacctccgaagtctcgtca
accccctcctcaccttcttccaatcccaaacccaattccctttcagcccgaatgagcttc
atcttcgatcaaatcgacgccattgaaaaagagcgctctcagaaggaccaaactctgcag
agaattcgagcctggcgtgagtcgaaggccaaccagaatccgcccgtcgaggatgggcaa
ccggaatcgacgttagggagtggtaatcttggggataatgttaataattcggagtctgct
ttgagaatggacgaagaaaatgaggtggaaaggacggagaagaagaggaaagaaattgaa
ttggtgcatccatggccggagtggattgagttgatggaaaggttagttcatcagaattac
tttgatcacaggaggaaagatgagaacaagatggtcgaagaattgggattcagtgcctct
gaccttgctttagaggaggatgtagggttggatttgtccaaggattttaaggcagtttat
actgcgtgcctgaattttgggaaggaccggttcgacattctcaggtcgttgtcaagaaaa
gacatccaaatattggttggttttgggtgcccaagtccagacaagaaggttgttttctct
gcaaaactcttgaggaagcttgttcatcttgatgaaggagatgtttgcagttcctgcagt
ttaagaaattcttgtgaaagagcatatttggtgactaataaagaagatgaggctcgcaca
atcgatattatgcgacttttatttacttttggttttgatcacatgaatggaactgttgtc
aatgattcccttctgaagcgaaaaacggttaaaacagttgttcgcaaattacttcatggg
gttgtcaagttgggttcagtcccaatagatcctactctctctcctcctgtaatcaaaagg
cctccaccaaaagtgaagcagcccccacctccaccaaagaagcgagtaggacgtgatgat
gttgagatgaaaaaaggggattggctttgtcccaagtgcgacttcatgaactttgcaaaa
aatatggtgtgcctgcagtgtgacgctaaacgtcctaagcggcagctgctaccaggcgaa
tgggaatgcccagaatgtaacttcttaaattataggagaaatatggcatgtttccattgt
gaatgcaagcggccaacagacacatttttagataatgaaaagcaagaaagacagcacgtt
ccttcgaggttcgaaaaggttgccaataggcaagaggtctctaatgcttggaatttcgac
ttcgacgatgatgagtcagatggggcagatgttgcagcttttgagtatgcagattcatca
gttgcagccgaaggatctcatgccgataatctggcgagaggaagcaaatataactccgat
ctcccagaaagacagcactctgatgctggaaatagaggtccaggcgtcggatttgacgat
tttgtcgatgaggaggacgatatcgacaattatgagctagatagctcagtgaacaattca
ggaaggcaacctcattcggttgatttttctgacattgaagggcactcaggatcagaagat
ggtgatgactttggccatagatctggtgtcccatcttataataagcgtccacgacgtcaa
caagcagctttctctgattctgagggcgatgaacttgattctgatgacgatatttctgct
aagaagaattggaaatctagtcatctgaccagttcaagacagaaaagtagagacaatggt
cgatcgaggaggggattaagctatggttctgatgaaaacctcgactccgatctcgatgag
gatttagatgaaagacctcgatctagacggagtgaaggaaaggatttcgactccaatagg
aagcattttcaaacgagaggaagttctcgtatgggcggtcgatcatccgaatcagatttt
gatgatttcgatagaggtatgcgtagacaaaaattgaaagggaatcagagggaaaataat
cgaaggggaagcgacactcgagctcgtggtgataaatacagtagaggaagtgagtttcag
tctaacaatttcaggaatggtagaaagaacacatttgatgacgattttgatgattttggt
gacaagtcccatcggtctcgtggtaccaattcaaggtttcgtgggaacagtcatggcggg
cgaggaacatatagctcggggagtcctaaagaaggttacaagaaagatcgaccaagaagg
tataatgaatacgatacaaccacagataaggattatggtgacttcaaaaacagtcgacgt
gttattgaaagatag
DBGET
integrated database retrieval system
