Cucurbita moschata (crookneck pumpkin): 111450684
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Entry
111450684 CDS
T05248
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 1-like
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111450684
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmos03019
]
111450684
Messenger RNA biogenesis [BR:
cmos03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
111450684
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
111450684
NCBI-ProteinID:
XP_022946691
UniProt:
A0A6J1G4C8
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All DBs
Position
Unknown
AA seq
216 aa
AA seq
DB search
MGDDGHVNAMEDDEASAAEQRGDIDIYPLRNYFFGSKEALLFKNEALADRVQRMNSNYAA
YGLRTYVGAVLLVELFKHPHLLLLRLRNSIFKLPGGRLRPNESDLDGLRRKLSSKLSAIG
ASDASDWEIGECLGMWWRPDFETFDPHLSSNVKGAKECTKLFLVKLPENREFFVPKNLKL
IAVPLCQIQKSHETYGPVISSIPQLLSKFSFNIIGT
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgggagacgacggacatgtaaatgctatggaggacgatgaagcttctgccgccgagcaa
cgcggagacatcgacatttaccctctcagaaactacttctttggatccaaagaggctctg
cttttcaagaacgaggccttggctgatcgcgtccagaggatgaattccaactatgccgct
tacggattgagaacttatgtcggagcagttttgctggttgaactatttaaacatcctcat
ttgttgctattgcgattacgaaattcaattttcaagcttcctggtggtcgcctaaggcct
aatgaatcagatcttgatggtctgagacgaaagctgtcaagcaagctatctgccattgga
gcctctgatgcatctgattgggagatcggcgagtgccttgggatgtggtggaggcctgac
tttgaaacctttgatccacacttgtccagtaatgtaaaaggcgccaaggagtgcactaaa
ctcttcctggtcaagctgccggagaatcgagaattcttcgtgccaaagaacctcaagttg
atagcagttcctttatgccagattcaaaaaagccatgagacgtacgggccagtcatatcg
agcattccacagctgctttctaagttctccttcaacatcattggaacctaa
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