Cucurbita moschata (crookneck pumpkin): 111450997
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Entry
111450997 CDS
T05248
Name
(RefSeq) protein CHROMATIN REMODELING 35-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111450997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmos03400
]
111450997
DNA repair and recombination proteins [BR:
cmos03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
111450997
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_16
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
111450997
NCBI-ProteinID:
XP_022946979
UniProt:
A0A6J1G5G2
LinkDB
All DBs
Position
Unknown
AA seq
883 aa
AA seq
DB search
MYGLFYERRKRLKLSTDGKDFPGAATISAQKDDVPRQNKMKNSAKVIDYSDPFAINNLID
SLDCGQFGSVTKEIEVLVSCKMQILSPYIAKYPTLSSMLFGLGRSKECTEAMDHQASQLV
HNNLIDLEDDSAIDVRDNDVEKSRLPIVIIDSDEEESYVPRRIHPFQEVVLPRPPGQSLF
KDKVVVGRRASNGEEATPIGESETISKKDRGVYVGVEEDEVSEQANSEEDGLEDIWNDMK
MALECSKDLDVAVDSSSDQQTTDDTTDCDHSFLLKEDLGYVCRICGVIDRGIETIFEFQY
NKGKKSTRTYMSESRNKDSGDVEVKISEDDLTVTEISAHPRHMKQMKPHQMEGFNFLISN
LVTDNPGGCILAHAPGSGKTFMIISFMQSFLAKYPQARPLVVLPKGILATWKKEFQIWQV
EDIPLYDFYSVKADNRAQQLTVLNQWVEHKSILFLGYKQFSTIVCEVETSSSSTACQNIL
LKVPTILILDEGHTPRNENTDILQALAKVRTPRKVVLSGTLYQNHVKEVFNIVNLVRPKF
MRSETSRPIIKRIMSRVDIPGVRKQFKAGVDSAFYDLVEHTLQKDKDFRRKVSVIHDLRE
MTSKILHYYKGDFLDELPGLVDFTVVLNLTSKQKHEGEKVKKFNRKFKISSAGSAVYLHP
KLNVFSVNAVVTDDKIDEVIDKLDVKDGVKAKFFLNMLNLCATTGEKLLVFSQYLLPLKF
MERLVVQKKGWSPGKETFMISGETTSEHRELSMERFNNSPDARVFFGSIKACGEGISLVG
ASRIIILDVHLNPSVTRQAIGRAFRPGQTKKVFAYRLVAADSPEEGDHSACFKKELIAKM
WFEWNEYCGYHDFEVTTVDVKDCGDNFLETPLLNQDVRVLYRR
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgtacggactgttttacgagagacgtaagagactaaaattatctactgatggaaaagat
ttccctggcgctgccaccatttctgcccaaaaagatgacgtaccgagacaaaacaaaatg
aagaactcggcgaaagtaattgattactctgatccgttcgccattaataatttgatcgat
agcttggattgtggtcagtttggaagtgtcactaaagagattgaagtccttgtttcgtgt
aagatgcaaattttaagtccttacattgccaagtatcctacgctgtcgagtatgttattt
ggtctggggagaagtaaagagtgtacagaggcaatggatcatcaagcttcccaattggtt
cataataatctcattgatttggaggatgattctgccattgacgttcgtgacaacgatgtt
gagaaatcacgattgcctattgtaataattgattccgatgaggaagaaagctatgttccg
aggcgtatacatccttttcaagaggttgttctgcctagaccacctggacaaagtctcttc
aaggacaaagtggtagtgggacgccgggcttcaaatggggaggaagcaactcctattggt
gaaagtgaaactataagtaagaaagacagaggtgtttacgtcggtgtagaagaggatgag
gtcagcgaacaggctaacagtgaagaagatggtcttgaagatatttggaacgatatgaaa
atggcattggaatgttccaaggacttggatgtcgctgtagattcatcatctgatcagcaa
actacagatgatactacggactgtgatcattcttttctcttgaaggaggatcttggttat
gtttgtcgcatttgtggagttattgacagaggaattgagaccatttttgagtttcagtac
aacaagggtaagaagagcacaagaacatacatgtctgaatctcgtaacaaagattcaggt
gacgttgaagttaaaatttcagaagatgatttgactgtaactgaaatttctgcacaccct
aggcatatgaagcaaatgaagcctcatcaaatggaaggtttcaatttccttataagcaac
ttggtaactgacaatcctggaggctgcattttggcgcacgctcctggatctggaaaaacc
tttatgataatcagttttatgcaaagttttttagctaagtatccacaggctagaccattg
gttgtgcttcccaaaggaatcttggctacatggaaaaaagagtttcagatttggcaagtg
gaagatattccactctatgatttctattctgttaaagctgataatagggctcaacagctg
acagtactgaatcagtgggtcgagcacaagagtattctgttcttaggatacaaacaattt
tccacaatcgtctgtgaggttgaaaccagttcatcatcaactgcttgtcaaaatatattg
ctcaaggttcctaccattcttattctagatgaggggcatactccaagaaatgagaacact
gatattttgcaagctcttgccaaagtcagaactccacgaaaagtggttctttcaggaacc
ctttatcagaaccatgttaaagaggtattcaatatagtgaatcttgttcgaccgaagttc
atgagatccgaaacttctcgacctatcatcaagcgcatcatgtcaagagtggatatacct
ggtgtgaggaagcagttcaaagctggtgttgattctgctttttatgatttggtggaacat
acacttcaaaaggataaagatttcaggaggaaagtgagtgtcatccatgatttacgtgaa
atgaccagcaagattttgcattactataaaggggattttctcgatgagctccctggattg
gtcgactttaccgtggtgttgaatctcacttctaaacagaagcacgaaggagaaaaggtt
aaaaagttcaataggaagttcaaaataagctctgccggcagtgctgtttatttacaccca
aagttgaatgttttctctgtgaatgctgttgtaacggatgacaaaatagatgaggtcatt
gataagctggacgttaaagatggagtgaaggcaaaattctttcttaatatgctgaatttg
tgtgccactaccggggagaagctgctggttttcagccaatacctgctccctttgaaattc
atggagagattggttgtgcagaagaaaggttggagtccaggaaaagaaaccttcatgata
tctggtgaaacaacttccgagcatcgggaattgtcgatggaacgcttcaacaactcgccc
gatgctcgagtcttctttggttccattaaggcctgtggggaaggcatatctctagtaggg
gcatcacgtatcattattttggatgttcatctgaatccatcagtgacccgccaagcaatt
ggtcgtgctttccgtcctggccaaactaagaaagtctttgcttatagattggtggctgct
gactctcctgaagagggggatcatagcgcttgcttcaagaaggaactgattgctaagatg
tggttcgagtggaacgagtattgtggctatcatgactttgaagtgacgactgttgacgtg
aaagattgtggcgataattttctagaaaccccacttctaaatcaagatgtcagagttctg
tacagaaggtag
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